Coregonus clupeaformis (lake whitefish): 121582906
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Entry
121582906 CDS
T08357
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4-like isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121582906
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
DCC/UNC5 family
121582906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
V-set
C2-set_2
Fn3_VIN3
C2-set_3
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
121582906
NCBI-ProteinID:
XP_045081202
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All DBs
Position
15:61747918..61807419
Genome browser
AA seq
1492 aa
AA seq
DB search
MHVASGIAGCRDPHAALPLCWKSMLYMAVETIWFFYLLSLGFCGPSVQEKPVMVELSCGA
GPVLVVLELGQPLLLECHLGATPLDTPLNVTWLQDGLPVLEGEGDSLRTLANGSLLVLPT
SVDGRTPQGVEGGYSCVSAGPFGALTSRTITVHLATLSRFHQDPEAQVVPVGGASRFECQ
IDGVPTPRITWEKDQEPIPSQPRFISLPNGVLQILGVVKEDGGAYRCVASNSARKRFSQD
AILTVTTGPVPAQSEVVIMAPPQNATVVQGHPAVMECVAQGGQPKPLVSWSRQDGKPIAT
DVVVLETNLVIPNTRRYHAGVYVCRANKPKTREFVIAAAELHVPAPPVILQPPETVSLSR
GNTARFVCNSSGEPPPALHWLKNGKPVKSNGRVKTQSPGVLLINQLGLDDAGYYQCIADN
ALGTACATAKLSVIVREGLPSPPRQLSATPHSSTTALLTWERPEHNSDQIIGFSVHYQPT
SGSDNMEYQFAVNNDTTEYHVKELLPHTTYTFYVVAYSPMGASRPSLPVTVEMLEDVPSA
PPQLSLLSTSPTDIRVMWLPLSSQHSRGAVTRYRIDYCKLEQVDNVLSVEVGGNETQLTL
RELQPNQAYRLRMAAGTRAGFGVPSEWAQHHTPDHFNHSMVIFAPTELKVRAKMNSLHVT
WQPPPNHTQISGYKLFCREVVGEDLTNGEAHPERERVRRMEAHTIKLRKRIKHHEVTSLV
PDRLYEVKVWAFNKQTDGYAAGWKGRTEKAHGKAPPKGNPPPLPPSSIKATANSSTSIWL
RWEKPRFSNVRIINYTVRCSPAGIRNASLVSYYTSSAQEILLGALKPYTRYELAVQSNGV
DVVGPFSGTVEESTLTDIPSTPPAELQLSALDSSSVLVNWRPPVEPNGVIISYRILYTIN
LSQPEHLWNNLSQDGTIMSAEVTGLSSGSQYFFKMGASTEVGVGPYSPVKDVHTPPKKYE
LDIHAVTGIIVGVCLGLLSILLCMCVSFRNGKAREVSGGLDSTALPPQYRRGGRSVPTMV
PECSDCHELETLMPLGSLDHDHDPAQPLTEPTEEHSLMGNVGVGDDALGAELKAAWNGSV
SRNWANRITRYRDTITEDSPTLNNGTLDMAKTENGKGDPEDRLGSSLCSSNQVEAEVIVH
SELSDLEKEQQEAQSDGEEDSQATRGPSLSEASYSPVRQPAQAPQHPREPVRQPAQEPQY
PGEPVRQPAQAPQHLGEPVRQPAQAPQHPGEPVRQPAQAPQHPGEPVRQPAKAPQHPGEP
VRQPAQEPQYPGEPVRQPAQAPQHLGEPVRQPAKAPQHPGEPVRQPAQAPQHPGEPVRQP
AQAPQHPGEPVRQPAQAPQHLGEPVRQPAKAPQHPGEPVRQPAQAPQHPGEPVRQPAQAP
QRPSQGEESLETQPLPKVPSGPVLEPVSNHNGQPEGMVGGMMGVAVQLTVDVGRHPGMGL
TNGFHSTKPLRPGQETLGNGDSRHCPAPPSPSPFVSAGLVHSNSAAHSYLCP
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttgctagcggtatagctggctgtagagacccacacgctgctttacccctctgc
tggaaatcaatgctttacatggcggtggagactatctggtttttctatctactttcgttg
ggcttctgtggaccatccgttcaagagaagcctgtgatggtggagctgagctgtggggca
gggcctgtcctcgtggtactggagctgggacagcccctgctgttggaatgtcacctgggg
gccacgcccctggacacgcctctcaacgtcacctggctgcaggatgggctacccgtgctg
gagggggagggggactccctcaggaccctggccaacggctcactgctggtgctgcccacc
tctgtggatggccggacccctcagggggtggaggggggctacagctgtgtgagcgccggc
ccctttggagccctgaccagccgcaccatcaccgttcacctggccacgctgtctcgtttc
catcaggacccagaggcccaggtggtgcccgtggggggtgcttcccgctttgagtgccag
atagacggagtgcccacgccaaggataacctgggagaaggaccaggaacccatccccagc
cagcctaggttcatctctctccctaacggtgtgctccagatcttgggggtggttaaggag
gatgggggtgcgtaccgctgtgtggcctccaactctgcccggaaacgcttcagccaggat
gccatcctcactgtcactacaggtcctgtccctgcccagagtgaggtggtgatcatggca
cctcctcagaatgccacggtggtgcaggggcatccagcggtgatggagtgtgtggcccag
ggggggcagcccaaacccctggtgtcctggagcagacaggatgggaagcccatcgccacc
gacgtggttgtcctggaaaccaacctcgtgatccccaacacacggcgttaccatgcgggg
gtctacgtctgccgtgccaacaaacccaagacccgcgagtttgtcatcgctgcggctgaa
ctgcatgtgccagccccaccagtgatcctccagcccccagagacggtgtctctctctcgg
ggaaacacagcaaggtttgtgtgtaacagctctggggagcctcccccggcgctgcactgg
ctgaagaatggcaagccggtcaagtctaacgggcgggtgaagacccagagccctggggtt
ctgctcatcaaccagctgggcctggatgacgcagggtactaccagtgcatcgctgacaac
gctctgggaacggcctgtgctacagccaagctgtctgtcatcgtgagagaaggtctaccc
agcccgccacgccagctctctgccacaccccactcaagcaccaccgccctcctcacctgg
gaacggcccgaacacaacagcgaccagattataggcttctctgtgcactaccagccaact
tcaggctctgataacatggaataccagtttgctgtgaacaacgacaccacagagtaccat
gtgaaggagctactgccacacacaacctataccttctacgtggtggcctactcccccatg
ggagccagccgcccgtcactgcccgtcaccgtggagatgctggaggacgtacccagtgcc
cctccacagctgtccctgctcagcacctcccctacagacatcagagtgatgtggctgccc
ctgtcctcccagcacagcagaggagctgtcacccgctaccgcatcgactactgcaaactg
gaacaggtggacaatgtgttgtctgtggaggtgggggggaatgagactcagcttaccttg
cgggagctgcagcctaaccaggcctatcgactgcggatggcagcgggaacgagagcaggc
tttggtgtgccatctgagtgggctcagcaccacaccccagaccactttaaccacagcatg
gtgatctttgctcccacagagctgaaggttagggccaaaatgaactccctccatgtcaca
tggcaacccccgcccaatcacacgcagatctccggctacaagctattttgcagggaggtg
gttggtgaggatctgaccaatggggaggctcatcctgagagggagagggtcaggaggatg
gaggcccataccatcaagctccgtaagagaatcaaacatcatgaggtcactagtctggtt
cctgacagactatatgaagtgaaggtgtgggccttcaataagcagacggatggctatgct
gcaggatggaagggcaggacggagaaggcacatggcaaagcgccccctaaggggaacccc
cctccactgccccccagcagcatcaaggctacagccaacagctccacatccatctggttg
cgctgggagaaacctcgcttcagcaacgtccgcatcatcaactacactgtacgctgtagc
ccggccggcatcagaaacgcatcgcttgtgtcctactacaccagctctgctcaggagatc
ctcttgggggcgctaaaaccctacacccgctacgagctggctgtgcagtccaatggagta
gacgtggttggtcccttcagcggcaccgtggaggagtccactctcactgacataccctcc
acccccccagcggagctgcagctcagtgccttggactcctcctctgtgttggtgaactgg
cgcccccctgtggagcccaatggcgtcatcatcagctacaggatcctatacaccatcaac
ctcagccagcctgagcatctgtggaacaacctctcccaagatgggaccatcatgagtgct
gaggtaacagggctgtctagtgggtcacaatacttctttaagatgggggcgtccactgag
gtgggggtggggccttattccccagtgaaggatgtgcacactcctcccaagaaatatgag
ctggacatccatgcagtgacaggcatcatagttggtgtgtgtctggggctgctcagcatt
ctcctttgtatgtgtgtcagcttccgcaacggcaaggccagagaggtgtctggggggctg
gactccacagctctgcccccacagtaccgtcgtgggggtaggtctgtacccaccatggtg
ccagaatgcagtgattgccatgagctagagaccctgatgcccctgggcagcctggaccat
gaccatgaccccgcccaacccctcacagagcccactgaggagcacagcctcatgggtaat
gtaggagtaggggacgatgccctaggagctgagctcaaggctgcttggaatgggtcagtt
agtcgtaactgggccaaccggatcaccagatacagggataccatcacagaggactctcca
actctcaacaatggaactctggacatggccaaaacagagaatggcaagggcgaccctgag
gaccgactgggctcctccctgtgcagcagtaaccaggtggaggcagaggtaatagttcac
tctgagctgtccgacctggagaaggagcagcaggaggcgcagagtgacggggaggaggac
tctcaggccaccagggggccctcactgtccgaggcatcttactccccagtcagacagcct
gcccaggcaccacaacatccacgagagccagtcagacagcctgcccaggaaccacaatat
ccaggggagccagtcagacagcctgcccaggcaccacaacatctaggggagccagtcaga
cagcctgcccaggcaccacaacatccaggggagccagtcagacagcctgcccaggcacca
caacatccaggggagccagtcagacagcctgccaaggcaccacaacatccaggggagcca
gtcagacagcctgcccaggaaccacaatatccaggggagccagtcagacagcctgcccag
gcaccacaacatctaggggagccagtcagacagcctgccaaggcaccacaacatccaggg
gagccagtcagacagcctgcccaggcaccacaacatccaggggagccagtcagacagcct
gcccaggcaccacaacatccaggggagccagtcagacagcctgcccaggcaccacaacat
ctaggggagccagtcagacagcctgccaaggcaccacaacatccaggggagccagtcaga
cagcctgcccaggcaccacaacatccaggggagccagtcagacagcctgcccaggcacca
caacgtccatcacaaggggaggagtccctagagacacaacccctgcccaaggtcccatcc
ggccctgtcctggagccagtgtccaatcacaatgggcagccagagggcatggttgggggc
atgatgggcgtggcagtccaactgactgtagatgtggggcggcacccaggaatggggcta
accaacggcttccactccaccaagcccctgcggccggggcaggagaccctggggaacggg
gactccagacactgccctgctcccccgtccccctctccttttgtcagcgccggccttgtc
cactctaactcagcagcgcacagctacctgtgcccttag
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