Coregonus clupeaformis (lake whitefish): 121582941
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Entry
121582941 CDS
T08357
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-4 isoform X1
KO
K04865
voltage-dependent calcium channel beta-4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121582941
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121582941
04261 Adrenergic signaling in cardiomyocytes
121582941
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121582941
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121582941
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GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
121582941
NCBI-ProteinID:
XP_045062438
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Position
23:4913487..4942478
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AA seq
542 aa
AA seq
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MQSRHIYIRNKIGEGIQATSFQVNRGTYSRRSRLKRSDGSTTSTSFILRQGSADSYTSRP
SDSDVSLEEEREVPGQVQGQSPSQAVPGTQAPAQTREQKEQQAALQLERAKAKAVAFAVK
TNVSYCGALDEDVPVPATAISFDAKDFLHIKEKFNNDWWIGRLVKEGCEIGFIPSPLKLE
NIRIQQEQKRGRVQGKSGGNSSSSVEDEVSASVRPLISSAGKQKQKATEHVPPYDVVPSM
RPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTADISLAKRSVLNNPSKRAI
IERSNTRSSLAEVQSEIERIFELARSLQLVILDADTINHPAQLLKTSLAPIIVHVKVSSP
KVLQRLIKSRGKSQSKHLNVQLVAADKLAQCPPEMFDIILDENQLEDACEHLAEYLEAYW
KATHTSMATPLNPLLGRNLGPTALTPYPTTISGLQTQRMRQHSNHTGDHSTPNERRNLMT
ADENYHNERAHKGRNRMSSGSQHSRDQDPYHQDYQDPYQDSYKPHRNRSSPGSYSHDSRH
RL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctcgacacatctacattcggaataagatcggtgagggcatccaagcgaccagt
tttcaggtgaaccgagggacctactccaggaggagccgattgaaaaggtctgatggcagc
accacctccactagcttcatcctcagacagggctcagctgattcctacacaagcagacca
tcggactcggatgtctctctggaggaggagcgggaggtgccgggccaggtccagggccag
agcccgagccaagcggtcccggggacccaggccccggcccagaccagagagcagaaggag
cagcaggctgccttgcagctggagagagccaaggctaaagccgtggcctttgctgtgaag
accaatgtcagctactgtggagcgttagacgaggacgtgccggtgccagcgaccgccatc
tcgttcgatgctaaggacttccttcacataaaggagaagttcaacaacgactggtggatc
ggccggctggtcaaggagggctgtgagatcggcttcatccccagtcccctgaagctagag
aacatccgcatccagcaggaacagaagcgagggcgagtccaaggtaagtctggagggaat
tcttcctcaagtgtagaggatgaggtgtccgcctcggtcagacccctcatctcctctgca
ggaaagcagaaacaaaaagcgactgaacacgttccgccttacgacgtggtgccgtccatg
aggcctgtggtgctggtggggccctccctcaagggctatgaggtgacggacatgatgcag
aaagcgctctttgacttcctcaagcacaggtttgacggcaggatatctatcacacgagtt
acggcagatatatcattagccaagaggtctgttctgaataaccccagcaagcgggccatt
atcgagagatcaaacaccaggtccagcttagcggaggtgcagagtgagatagagaggatc
tttgagctggccaggtccctacagctggtgatcctggatgcagacaccattaatcaccca
gcccagctgctcaagacctcgttggctcccatcatcgtccatgtcaaggtctcctcgccg
aaggttctgcagaggctgatcaagtccagagggaagtcccagagcaagcatctgaacgta
cagctggtggcagctgacaaactagcccagtgtcctccggagatgtttgacatcatcctg
gatgagaaccagttggaggatgcgtgtgaacacctagctgagtacctggaggcctactgg
aaagccacccacacctccatggccacgccgctcaaccccctgctgggacgcaacctgggc
cccactgccctcactccttaccccaccaccatctctggactgcagactcaaagaatgaga
caacacagcaaccacacgggagaccactccacgcccaacgagcgtcgcaacctgatgacc
gccgacgagaactaccacaacgagcgggcgcacaagggacgcaaccgcatgtcgtcgggc
tcgcagcacagccgagaccaagacccgtaccaccaggactaccaggacccctaccaagac
tcctacaagccccaccgcaaccgctcctccccgggcagctacagccatgactcccggcac
aggctttga
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