Coregonus clupeaformis (lake whitefish): 121582956
Help
Entry
121582956 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121582956
03037 Cilium and associated proteins [BR:
cclu03037
]
121582956
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
121582956
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121582956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
121582956
NCBI-ProteinID:
XP_045075667
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
LLKKVSRLLYNIVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIV
IPELLAGEPFGTTRVKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYSPVREDRQCGY
RLPLAYFLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEA
AESKGAAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRS
QKLEQEKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYL
GNLYSLIIALLDKVNSMSLASAAAAAAVSVVSGNWSDSTAFMATISQSGEESLSTLVSDI
SVLEQRNSTIATIAMVLDVNTGISTSKVTMATMYNHTGLFEQNKQKKQDECWETYVGQEM
LKLSIIDMIFTVASILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQ
GMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFML
FLCMLPTIFAIVRYRPSQHCGPFSGQEKIYDIISETIANDFPLWFSKVMSYVTSPVVALP
ALLLLFMLIYYLQAIARSLKFTNNQLRMQLQTERTEDKKKVFQLASARLQATEVPGGDRK
PDQQDSDITSRESSIRTPSPRRNGSVTNFQSPDRHGHPAYLGGPERYLQVQVLPPCGLQP
PTRYSSENIHSDPLFRKTIRPMHPTEAAGIVTAQSHVGRRPHTTRYVIVNEHELGKAARS
ATRVXRHFRAEDPVGEIVELIPRNIKRYTPRAPHLHGHPHRSNPPQSHLSEEEDEEEGGG
KRESRRGLFGQTHRPRSLSDLHQPARFYIGERLESKLSMAPKDSHTARGRYGGEAQEGDW
EDMETRLHSLSQTSIRGAELPPPVRHTQSPARHSHGPGRRLELQVKPKTSRSKMEPSLTE
SDSASLASSSDQQNSSTDQYIQVIHNKEKYLKSEARQGKLAKKKSKASIDTNVSGSKELV
FSNV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
ctgctgaagaaggtctccaggttgctgtacaacattgtggttctgttcattccctgggag
atgaggatcaagaaaatagaaagtcactttgggtcaggggtggcctcgtacttcatcttc
ctccgatggctgtttggtatcaacatagtccttaccatcatgactggagcattcatagtc
atacctgagctcctggccggagagccatttggaacgacccgagtaaaaaccattcccaag
gagcacctggcctcagctcaggatctggacaccatctggtctctcgggggctatctccag
tactctgtgttgttctatgggtactacagcccggtgagggaagatcggcagtgcggctat
cgcctccccctggcctactttctggttgggatggctgtttttgcctacagtttcatcatt
ctgttaagaaagatggctaagaactcccgtctgagcctggccagtgcctctgacgagaac
ttcaccttctgctggagagtgttctgtgcctgggactacctcatagggaatcctgaagct
gcagagagcaagggagccgctatcgtcaacaacatcagggaggccattgttgaggaacag
gagaaaaagaaggatactagtctagcagtcctgatcagtctgcgtatcctagccaacatc
ctggtccttctctctctggctggcagcatttatatcatctactttgtggtggaccgctcc
cagaaactagagcaggagaagccagagctaacactatgggagaagaatgaggtgagtgtg
gtggtgtccctcatcaccatgatcgccccgtctgcctttgagctggtggcccagctggag
atgtatcatcccaggacctccctccgcttccaactggccagagtactggtgttgtatctg
ggtaacctctacagcctcatcattgcccttctggacaaggtcaacagtatgagtctggcc
tcagctgctgcagctgcggcggtctctgtggtgtcggggaactggtctgactccaccgcg
ttcatggcgaccatctcccagtcgggggaggagagcctctccaccctcgtatcggacatc
tccgtcttggaacaacgcaacagcaccatagcgaccatcgccatggtgctggacgtcaac
acaggcatcagcaccagcaaggtcaccatggcaaccatgtacaaccacactgggttgttt
gagcagaacaagcagaagaaacaggacgagtgctgggagacctacgtgggacaggagatg
ttgaagctgtctatcatcgatatgatcttcacggttgccagtatcctgttgatagacttc
atcagagggctggtggtcaggtacctgagtgactgctgctgctgggacctggaaagcaag
tttcctgagtatggggaattcaagatagctgagaatgtactccacctgatatataaccaa
ggaatgatctggatgggtgcattcttctctccctgtctgcctgcctttaacgtgttgaag
ctgataggcttgatgtacctgaggagttgggctgtgctcacctgcaacgtccctcaccaa
caggtgttcagagcatccagatcaaataatttctacctggctatgctgttgttcatgctg
tttctatgtatgctgcccaccatctttgccattgtgagatacagaccttcccaacactgc
gggccatttagcggtcaggagaagatttatgacataatctcggagacgatagccaatgac
ttcccgctgtggttcagtaaagtgatgagttatgtcaccagccctgtcgtagcgctgccc
gctctgctgctgctgttcatgttgatatactaccttcaggccatcgccagatccctcaaa
ttcaccaacaaccagctgaggatgcagcttcagactgagagaacagaagacaagaagaag
gtattccagctggcttcagcgaggctacaggccacggaggtccctggcggggacaggaag
cctgaccagcaggacagtgacatcaccagccgcgagtcgtccattcgcacgccgtcgccc
cgacgcaacggcagcgtcacaaacttccagtcgcctgatcgacacggacaccctgcctac
ctgggaggccctgagcggtacctgcaggtccaagtcctaccaccatgtggcctacaaccc
ccgacacgctactcctcagagaacatccactccgaccccctcttcaggaagaccatcagg
cccatgcaccccacagaggcagctgggatagtgaccgcccagagccacgtgggccgtcgc
ccccacaccacgcgctacgtcatcgtcaacgagcacgagctaggaaaagctgctcgatcc
gccacgcgcgtcnctcgccacttccgagcggaggacccggtgggtgagatcgtggagctg
atcccgcggaatatcaagcggtatactccaagggctccgcatctgcatgggcacccgcat
aggtcgaatccgccgcagtcgcacctgagtgaggaagaggatgaggaagagggagggggg
aagagggagtctaggagggggttgttcgggcagacgcaccggccccgctcgctctccgac
ctccaccagccggcgcgcttctacatcggagagcgcctggagagcaagttgtctatggca
ccgaaagacagccacaccgctagggggcgctacggcggtgaagcccaagaaggggactgg
gaggatatggagacgcgcttgcactccctctcccagaccagcatcagaggagccgagctt
ccaccaccagtcaggcacacacagtccccggccagacactcccacggccctggaagacgc
ctggagctccaggtcaagcccaagacgtccaggtcgaagatggagccttccctgactgag
tcggactcggcctctctggcctccagtagcgaccagcaaaacagcagcacagaccagtac
atccaggtcattcacaacaaggagaagtacctcaagtctgaggccaggcaaggcaagctg
gctaagaagaagtccaaagccagtatagacaccaacgtgtctgggtctaaagaactggtc
ttctccaatgtgtag
DBGET
integrated database retrieval system
