Coregonus clupeaformis (lake whitefish): 121582961
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Entry
121582961 CDS
T08357
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121582961 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121582961 (efl1)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
GTPases
121582961 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
121582961
NCBI-ProteinID:
XP_041755081
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All DBs
Position
15:64348760..64465168
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AA seq
1157 aa
AA seq
DB search
MGHTSLDKIKALQKNPANVRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYAAGEKDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLILELKLTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEDRAVKEERAEEDKEEGDVKPAECLGSEQVYDWSAGLEDSDDSQLYFSPDQGNV
VFASAIDGWGFSIQQFAQIHSLRMGIRTEVLLKTLWGDFYLNAKAKKIMKGAQAKGKKPL
FVQLVLDNVWSLYDAVVTRRDKEKTEKMMMSLGVKVMTRDSRHSDPKVLLSAICSQWLPV
SQAVLSMVCDKLPSPLDMTSERIERLMSVGARRFHSLPLQTQELKTAFMQCSSDDTAPVI
VFVSKMFTVDAKALPQNKQRPLTQEEMAQRRELARQRHTERLAANQQTESGEGNAHSGST
TPATTPDGDSSIGSEGVSGQMKALPLKAKPEEEGKETFVAFARVYSGVVRRGQKVFVLGP
KYDPAQGLRMLPEGSTSVSDCLPPVPHLACCTMDSLYLLMGRELEELEEVPSGNVLGIGG
LEECVLKSATLSTSPALPPFIPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCA
EVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVIRPPKVDMVNE
DLGKQQKVAVLHQVKESDTLHLDPSGLVTLTTPNRQATVGVRAIPLPEEVTLLLEDSADL
IRTLEQAGQAQREGRTLDMSTRTLDALMGMKSRLEALLQGRKWRNAVDRIWAFGPRRYGP
NILLNSVEGYQRPSVWHCLEREKGENEGGEKAEAGSIRDFDNSVVSGFQLATLSGPMCEE
PLMGVCFSVERWDINFPTQGTHLESVTEEDANSHDASASISESPGEAGGQQEASGKAGVV
GETPPQAEGAVAGASQGRRRAEVGAGLVDCYGPFSGQLIAAVKEACRHAFQAKPQRLMAA
MYTCEIMATAEVLGRVYGVLGKREGRVLQEEMKEGTEMFIIKAVLPVAESFGFADEIRKR
TSGLASPQLVFSHWEVISSDPSWVPTTEEEYLHFGEKADSANQALKYMNAVRRRKGLYVE
EKIVEHGEKQRTLSKNK
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgggacacacaagtttggataagatcaaagcactacagaagaatcctgccaacgtcagg
aacctgtgcattctggcacacgtggaccatggcaaaacaactctggcagatagcttggtg
gcgagcaatggcattatatcaagtcgcttagccggaaagctgaggtacctggacagccgg
gaggatgagcagatccgagggatcacgatgaagtccagcgctatctcactgcactatgct
gctggggagaaggactacctgataaacttgattgactcgccgggccatgtggacttctcg
tctgaggtgtccaccgccgtcagactatgtgacggggccattgtcatcgtagatgctgtg
gagggagtttgtccacagacccaagcagtgctgcgtcaggcgtggctggagaacatcagg
cctgtgctggtgatcaacaagattgaccggctcatcttggagctgaagctcacctctcag
gaagcctacacacacctgcagaagattctagaacaggtgaatgcagtgacaggctctctg
tttacctccaaagtgctggaggaccgtgcggtgaaagaggaacgggcggaggaagataag
gaggagggggacgtcaagcctgctgagtgtctcgggtcagagcaggtatacgactggagc
gccggcctggaggattcggacgactcccagctctacttctctccagaccaggggaatgtg
gtcttcgccagtgccatagacggatggggcttcagtatccagcagtttgcccagatccac
agcctgaggatgggcatcaggactgaggtgctcctgaagaccctctggggagacttctac
ctcaatgctaaagccaagaagatcatgaagggagctcaggccaaaggaaagaagcctctg
tttgttcagctcgtcctggacaacgtatggagtttatatgacgctgtcgttaccagacga
gataaggagaagacagagaagatgatgatgtcactaggtgttaaggtgatgaccagagac
tcccgtcactccgaccccaaagtcctcctctctgccatctgcagccagtggctccccgtc
tcacaggctgtactctccatggtgtgtgataagctgcccagtccgttggacatgacctct
gagagaatagagagactgatgagtgtgggagcacgcaggttccactcactacccctgcag
acccaggagctgaagacagccttcatgcagtgttccagtgatgacacagcccctgtcatt
gtgtttgtgtccaagatgtttacagtggatgccaaggccctgcctcagaacaaacagagg
ccgttgactcaggaggagatggcccagcgcagggagctggccagacagagacacactgag
agactggcagccaatcagcagacggaaagcggggagggaaatgcccactcaggaagtaca
acaccggcaaccacccctgatggagacagcagcataggtagtgagggtgtctcaggccag
atgaaggccctgcctctgaaggctaaaccggaggaggaggggaaggagacgtttgtagcc
ttcgccagagtctacagcggggtggtccgtagaggacagaaggtgtttgtgctggggccc
aagtacgaccctgcacaaggcctgcgcatgctcccagagggcagtactagtgtgagtgac
tgtctccctcctgtccctcacctggcctgctgcaccatggacagcctctacctgctgatg
ggccgagagctggaggaactagaagaggtgccgtcaggaaacgtactgggtattggcggt
ctggaggagtgtgtgttgaagtctgcaaccctctccacctcccccgccctccccccattc
atccccctcaacttcgaagctacgcccatcgtacgagtggccattgaacccaaacaccca
agtgagatgcctaagctggtacggggtatgaggctgttgaaccaggctgacccgtgtgct
gaggttctgatccaggagacaggagaacacgtactggtcacggccggagaggtccacctg
caacgctgtctggacgacctccgagagaggtttgccaagattgagatcagtgcctccaag
ccgatcatcccattcagagagaccgtgatcagaccacccaaagtggacatggtcaatgaa
gacctggggaaacaacagaaggtggctgtgctccaccaggtgaaagagtcagacaccctg
cacctggaccccagtggcctggtcaccctcaccacccccaacagacaggccaccgtgggg
gtacgggccataccgctacccgaagaggtgactcttctactggaggatagtgctgacttg
atccggaccctggagcaggcaggtcaggcccagagggaggggaggaccctggacatgagt
acccggaccctggatgccctgatggggatgaagagcaggctggaggccctgctgcagggg
aggaagtggaggaacgcagtggaccggatatgggccttcggaccacgcaggtatggacca
aacatcctactgaacagcgtagaggggtaccagagaccgtccgtgtggcactgcctcgaa
cgagagaagggagagaatgagggaggggagaaagctgaggctggctccatccgagacttt
gacaacagcgttgtcagcggtttccagctcgccaccctctctggtcccatgtgcgaggag
cccctcatgggcgtctgcttctccgtggagagatgggacattaacttccccacccagggg
acccacctggagtctgtgactgaagaagacgccaactcccatgatgcatcagcgtccatt
tccgaaagccccggtgaggctggaggtcagcaggaggcctcaggcaaggcaggggtagtg
ggtgagacgcctccccaggcagagggtgccgtggctggggcgagccaggggagacgcagg
gcggaggttggggccgggctagtggactgctacgggccgttctctggccagctcatagct
gctgtgaaggaggcttgtcgacacgcgttccaggccaaacctcagagactcatggctgct
atgtatacctgtgagataatggctacagcagaggtgttaggtcgtgtgtacggggtcctg
gggaagagagagggccgtgtgttacaggaggagatgaaggaggggacggagatgttcatc
atcaaggcggtccttcctgtggccgagagcttcggattcgcagacgagatacgcaaaagg
accagtggattggctagtccacaactggtcttcagccactgggaggtgatctccagtgat
ccgtcctgggttcctaccacagaagaggagtacctccactttggagagaaggccgattcg
gccaatcaggctctgaaatacatgaacgctgttcgccggcgcaaaggactgtacgtggag
gagaagatagtggagcacggcgagaaacagagaacacttagcaagaacaaatag
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