KEGG   Coregonus clupeaformis (lake whitefish): 121582961
Entry
121582961         CDS       T08357                                 
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    121582961 (efl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cclu03009]
    121582961 (efl1)
Ribosome biogenesis [BR:cclu03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    121582961 (efl1)
SSDB
Motif
Pfam: GTP_EFTU EFL1 EFG_C EFG_III GTP_EFTU_D2 EF-G_D2 MMR_HSR1 EFG_IV
Other DBs
NCBI-GeneID: 121582961
NCBI-ProteinID: XP_041755081
LinkDB
Position
15:64348760..64465168
AA seq 1157 aa
MGHTSLDKIKALQKNPANVRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYAAGEKDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLILELKLTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEDRAVKEERAEEDKEEGDVKPAECLGSEQVYDWSAGLEDSDDSQLYFSPDQGNV
VFASAIDGWGFSIQQFAQIHSLRMGIRTEVLLKTLWGDFYLNAKAKKIMKGAQAKGKKPL
FVQLVLDNVWSLYDAVVTRRDKEKTEKMMMSLGVKVMTRDSRHSDPKVLLSAICSQWLPV
SQAVLSMVCDKLPSPLDMTSERIERLMSVGARRFHSLPLQTQELKTAFMQCSSDDTAPVI
VFVSKMFTVDAKALPQNKQRPLTQEEMAQRRELARQRHTERLAANQQTESGEGNAHSGST
TPATTPDGDSSIGSEGVSGQMKALPLKAKPEEEGKETFVAFARVYSGVVRRGQKVFVLGP
KYDPAQGLRMLPEGSTSVSDCLPPVPHLACCTMDSLYLLMGRELEELEEVPSGNVLGIGG
LEECVLKSATLSTSPALPPFIPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCA
EVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVIRPPKVDMVNE
DLGKQQKVAVLHQVKESDTLHLDPSGLVTLTTPNRQATVGVRAIPLPEEVTLLLEDSADL
IRTLEQAGQAQREGRTLDMSTRTLDALMGMKSRLEALLQGRKWRNAVDRIWAFGPRRYGP
NILLNSVEGYQRPSVWHCLEREKGENEGGEKAEAGSIRDFDNSVVSGFQLATLSGPMCEE
PLMGVCFSVERWDINFPTQGTHLESVTEEDANSHDASASISESPGEAGGQQEASGKAGVV
GETPPQAEGAVAGASQGRRRAEVGAGLVDCYGPFSGQLIAAVKEACRHAFQAKPQRLMAA
MYTCEIMATAEVLGRVYGVLGKREGRVLQEEMKEGTEMFIIKAVLPVAESFGFADEIRKR
TSGLASPQLVFSHWEVISSDPSWVPTTEEEYLHFGEKADSANQALKYMNAVRRRKGLYVE
EKIVEHGEKQRTLSKNK
NT seq 3474 nt   +upstreamnt  +downstreamnt
atgggacacacaagtttggataagatcaaagcactacagaagaatcctgccaacgtcagg
aacctgtgcattctggcacacgtggaccatggcaaaacaactctggcagatagcttggtg
gcgagcaatggcattatatcaagtcgcttagccggaaagctgaggtacctggacagccgg
gaggatgagcagatccgagggatcacgatgaagtccagcgctatctcactgcactatgct
gctggggagaaggactacctgataaacttgattgactcgccgggccatgtggacttctcg
tctgaggtgtccaccgccgtcagactatgtgacggggccattgtcatcgtagatgctgtg
gagggagtttgtccacagacccaagcagtgctgcgtcaggcgtggctggagaacatcagg
cctgtgctggtgatcaacaagattgaccggctcatcttggagctgaagctcacctctcag
gaagcctacacacacctgcagaagattctagaacaggtgaatgcagtgacaggctctctg
tttacctccaaagtgctggaggaccgtgcggtgaaagaggaacgggcggaggaagataag
gaggagggggacgtcaagcctgctgagtgtctcgggtcagagcaggtatacgactggagc
gccggcctggaggattcggacgactcccagctctacttctctccagaccaggggaatgtg
gtcttcgccagtgccatagacggatggggcttcagtatccagcagtttgcccagatccac
agcctgaggatgggcatcaggactgaggtgctcctgaagaccctctggggagacttctac
ctcaatgctaaagccaagaagatcatgaagggagctcaggccaaaggaaagaagcctctg
tttgttcagctcgtcctggacaacgtatggagtttatatgacgctgtcgttaccagacga
gataaggagaagacagagaagatgatgatgtcactaggtgttaaggtgatgaccagagac
tcccgtcactccgaccccaaagtcctcctctctgccatctgcagccagtggctccccgtc
tcacaggctgtactctccatggtgtgtgataagctgcccagtccgttggacatgacctct
gagagaatagagagactgatgagtgtgggagcacgcaggttccactcactacccctgcag
acccaggagctgaagacagccttcatgcagtgttccagtgatgacacagcccctgtcatt
gtgtttgtgtccaagatgtttacagtggatgccaaggccctgcctcagaacaaacagagg
ccgttgactcaggaggagatggcccagcgcagggagctggccagacagagacacactgag
agactggcagccaatcagcagacggaaagcggggagggaaatgcccactcaggaagtaca
acaccggcaaccacccctgatggagacagcagcataggtagtgagggtgtctcaggccag
atgaaggccctgcctctgaaggctaaaccggaggaggaggggaaggagacgtttgtagcc
ttcgccagagtctacagcggggtggtccgtagaggacagaaggtgtttgtgctggggccc
aagtacgaccctgcacaaggcctgcgcatgctcccagagggcagtactagtgtgagtgac
tgtctccctcctgtccctcacctggcctgctgcaccatggacagcctctacctgctgatg
ggccgagagctggaggaactagaagaggtgccgtcaggaaacgtactgggtattggcggt
ctggaggagtgtgtgttgaagtctgcaaccctctccacctcccccgccctccccccattc
atccccctcaacttcgaagctacgcccatcgtacgagtggccattgaacccaaacaccca
agtgagatgcctaagctggtacggggtatgaggctgttgaaccaggctgacccgtgtgct
gaggttctgatccaggagacaggagaacacgtactggtcacggccggagaggtccacctg
caacgctgtctggacgacctccgagagaggtttgccaagattgagatcagtgcctccaag
ccgatcatcccattcagagagaccgtgatcagaccacccaaagtggacatggtcaatgaa
gacctggggaaacaacagaaggtggctgtgctccaccaggtgaaagagtcagacaccctg
cacctggaccccagtggcctggtcaccctcaccacccccaacagacaggccaccgtgggg
gtacgggccataccgctacccgaagaggtgactcttctactggaggatagtgctgacttg
atccggaccctggagcaggcaggtcaggcccagagggaggggaggaccctggacatgagt
acccggaccctggatgccctgatggggatgaagagcaggctggaggccctgctgcagggg
aggaagtggaggaacgcagtggaccggatatgggccttcggaccacgcaggtatggacca
aacatcctactgaacagcgtagaggggtaccagagaccgtccgtgtggcactgcctcgaa
cgagagaagggagagaatgagggaggggagaaagctgaggctggctccatccgagacttt
gacaacagcgttgtcagcggtttccagctcgccaccctctctggtcccatgtgcgaggag
cccctcatgggcgtctgcttctccgtggagagatgggacattaacttccccacccagggg
acccacctggagtctgtgactgaagaagacgccaactcccatgatgcatcagcgtccatt
tccgaaagccccggtgaggctggaggtcagcaggaggcctcaggcaaggcaggggtagtg
ggtgagacgcctccccaggcagagggtgccgtggctggggcgagccaggggagacgcagg
gcggaggttggggccgggctagtggactgctacgggccgttctctggccagctcatagct
gctgtgaaggaggcttgtcgacacgcgttccaggccaaacctcagagactcatggctgct
atgtatacctgtgagataatggctacagcagaggtgttaggtcgtgtgtacggggtcctg
gggaagagagagggccgtgtgttacaggaggagatgaaggaggggacggagatgttcatc
atcaaggcggtccttcctgtggccgagagcttcggattcgcagacgagatacgcaaaagg
accagtggattggctagtccacaactggtcttcagccactgggaggtgatctccagtgat
ccgtcctgggttcctaccacagaagaggagtacctccactttggagagaaggccgattcg
gccaatcaggctctgaaatacatgaacgctgttcgccggcgcaaaggactgtacgtggag
gagaagatagtggagcacggcgagaaacagagaacacttagcaagaacaaatag

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