Coregonus clupeaformis (lake whitefish): 121583048
Help
Entry
121583048 CDS
T08357
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121583048 (cdhr5a)
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Cadherin related
121583048 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
4HBT
Motif
Other DBs
NCBI-GeneID:
121583048
NCBI-ProteinID:
XP_041755197
LinkDB
All DBs
Position
32:complement(3353638..3373840)
Genome browser
AA seq
762 aa
AA seq
DB search
MTFWRVSLKVIYSINKKLTSMTGAWAARARGPLRGFPVRQCLHGFSLHYQLLLTTLSNNH
TATTAFTEEANEVCTVSPDPVSIKENSTVDLLVATINCGDDVQLTITENPEDAFYLRGTD
LIAKRGLDFESLPSVDDALWVRVRCNRTGSRSVNVSVEVFIENVNDNPPNFAQSHYVLQV
NELTPVNTSVGLIEATDIDSEPLYYRLESVTNRYLRLENPNTPNILVQNTIDYDSVQKIS
LVLHVQDTYNISESGEPSFTAVVTITVNVKDIDNRPPWFQPCVRTNLGTAKLCVSSGYRA
KVNLTEKEDGPLSLEPGPLYAKDGDRNRSELISYRILRGNEGSIFQIDEETGNISMVKAA
DIAGPITLTVLASQVTNRDQFAVTQVNIEVLKKSRNPPRFEKERYEGYIYSNSVPESMIL
RDRTSNRPFRVRARDEDFATGVNPDMRYEVQYSSYVNVTTEGFVLLKRVVKTESFALQIR
AMDPSTGEFGTAALSVLVIPAVAVPSPSGAGYRAGDMALLGLVMAAILVLCFIVIGFLIS
HLKKGGTNLDKITECLVPCLKMARPPGRPKDSLQYTNDGYQGTEGDALRGGPRLPAPVDK
RGRGATVPGDRGRAIPLERRWSDRHCGFCGLYANHNHHAKPSPASSPARGGGRGGGGDKD
GMRSILAKGGRKEGGKSVWFKENEDASGIEVEIIPDTLGQEEETEEEEEEEEVDMEEVKG
GDRSMSSQTEVDGGHGDQEIDGGHGDQESQGESDSAGKEKEG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgactttttggagggttagtctcaaagtgatttattcaataaataaaaaattgacatcg
atgacaggcgcttgggccgccagagctcgtgggcccctgcgggggtttccggtacgccag
tgcttacacggcttttcgttacattatcaactgttactaacgaccctcagcaataaccac
acggctacgacggcgtttacagaggaagcaaatgaagtctgcacagtttctcctgacccc
gtgtctataaaagagaacagcacagtggaccttctagtagccaccatcaactgtggtgat
gatgttcagctgaccatcacagagaaccccgaggatgctttctacctgcgggggacggac
ctcatcgccaagagaggactggactttgagtccctgcccagtgtggacgatgctctgtgg
gtccgggtgcgctgcaacagaactggctccagatcagtgaacgtgtctgttgaagttttc
attgaaaatgtgaacgataatcctccgaacttcgctcagagtcattatgttctccaggtg
aacgagctgactcctgtgaacaccagtgttggtctgattgaggcaacagacattgactct
gagcccctgtactaccgtttagagtcagtcacgaacaggtatctacgactggagaatccc
aacacccccaacatactggtgcaaaacaccatcgactacgactccgtccaaaagatctcc
cttgtcttacacgtgcaggacacgtacaacatttctgagtctggcgagccttcgttcact
gccgtggtgaccatcacggttaacgtgaaggacattgacaaccgtccaccgtggttccag
ccctgtgttagaaccaacttggggacagccaaactgtgtgtcagctccggctacagggca
aaggtcaacctcacagagaaagaggatgggcctttatctctggagcctggtccgttatac
gccaaggatggagacagaaacaggagtgagctgatcagctacaggatactcagaggaaat
gaaggcagcatcttccagatcgatgaggagacggggaacatctccatggtcaaagccgca
gacatcgcaggcccaataaccctcactgtcctggcctcccaggtcaccaacagggaccag
tttgcggtgactcaggtcaacatcgaggtgctgaagaagagcaggaaccctccgcggttt
gagaaggagcgttatgaaggatacatctacagtaactcagtcccagagagcatgatccta
cgagacagaacctccaacagacccttcagggtcagggccagagacgaggactttgccact
ggggtaaacccagacatgagatatgaggtgcagtacagcagttatgtcaacgtgacaaca
gaagggtttgttcttctgaagagggttgtgaagacagagtctttcgctctgcagattcgt
gctatggacccgtctacaggggagtttggtacagcggccctctctgtcctggttatacca
gctgtggcggttccttcgccctcgggggcggggtaccgggcgggggatatggctctgctg
ggattggtcatggcagccatcttggtgctctgcttcatcgtgattggcttcctgatctcc
cacctgaagaaaggaggcaccaacctggataagataactgagtgtttggttccatgtctg
aagatggcgaggcccccagggagacccaaggacagcctgcagtacaccaacgatggctac
cagggtaccgagggtgatgccctgcgcggcggacccagactcccagcgccggtagacaag
aggggccgaggtgctactgtccctggggacagaggcagggccatccccctggagcgacgc
tggagcgaccgccactgtggcttctgcggcctgtacgccaaccacaaccaccatgccaag
cccagcccggccagcagccccgctaggggaggggggagaggaggaggaggagacaaggac
gggatgaggtccatcctcgccaaggggggaaggaaggagggagggaagtcagtgtggttc
aaggagaacgaggatgcgtctgggatcgaggtggagatcattccggatacgctgggtcag
gaggaggagactgaggaggaggaggaggaggaggaggtggacatggaggaggtgaagggg
ggagacaggagcatgtctagccagacagaggtcgatggtggccatggagaccaggagatc
gatggtgggcatggagaccaggagagccagggagagtctgattcagctggtaaagagaag
gagggttga
DBGET
integrated database retrieval system
