Coregonus clupeaformis (lake whitefish): 121583068
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Entry
121583068 CDS
T08357
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A-like
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121583068
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121583068
04082 Neuroactive ligand signaling
121583068
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121583068
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121583068
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Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
121583068
NCBI-ProteinID:
XP_045072020
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All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MYIQIESESNVFMPRDSIILAMETLNRMVGLLPYNLSLEVVMAVEAGLGELPAYSSSTPG
CEDPMSFLQSVCHTVIVQGVSAMMAFPQTRDELLKLEFIASALQIPVISVVQNEFKRQSK
NPLHFQMPMHNPALHQVELLYSLLVINSWYDVSLLLCQEWNVSSFLVRLRNNTKFHLGSV
VNITTSSTSSGSHPNSSIFKADFYTSLQGYLESIKKSTSTVVTFGCDIRDIKRIFSVVAK
LGLMLPEYHWVLGDTQDLEELRTEGLPAGLLAHGRMGAPSLDHYVQDGLELVARVVGSAA
YRSPELALIPSITNCMDTQSNQNRNMTSGKYLARFLSNTSFDGLSGFISSQQETVISSES
HHFIWSLQHDPIGNPMWTRLGRWKQSRVLLDYAAWANKKGADWRYPSRLHLRVVTLVEHP
FVFTREVDEDGLCPAGQLCLDPLTNNTALLQSLFLQGLNDSIPMKYKKCCYGYCIDLLEK
LAEDIGFDFDLYIVGDGKYGGFKNRRWTGLVGDLLSGAAHLAVTSFSINSARSRVIDFTS
PFFSTSLGILVRSRDTAAPIGAFMWPLHWSMWLGIFVSLHVTAVFLTVYEWNSPFGMTPR
GRNRDKVFSFSSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAA
VMVGEKTFEQLSGIHDPKLHHPSQGFRFATVRESSAEDYLKKSFPEMHGYMTRYNVPATP
DGIEHLKHDPQQLDAFIMDKALLDYEVSIDADCKTLTVGKPFAIEGYGIGLRQNSPLTSN
LSELVSQYKSDGFMDMLHDKWYKVLPCGKQSFAATETLQMGIKHFSGLFLMLCVGLGLSL
LTTLAEHIIYHFIIPRVKDPKFKYWLHTSQRLHRAMNSSFNEDKLQTVAKPQERCNMGNN
QQQQQPCNSSESNCNRRKIPPQESQLNVKSLVPPQATSNRRTDRVQVGLQARTIPMLQEL
SELETHIPVIKQQLHIAMKKKRELEQYQQTYKMTE
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgtatatacagatcgagagtgagagtaatgtgtttatgccgagggactctatcatatta
gccatggagacgttgaaccgcatggtcggtctgttaccatacaacctctcactggaggtg
gtgatggctgtggaagcggggctcggggaattacccgcctactcctcctctaccccgggc
tgtgaagaccccatgtcgtttctgcagagtgtttgtcatactgttatagtccaaggagtt
tctgctatgatggctttccctcagaccagggacgaactgctgaagttggaattcatcgcg
tcagcgcttcaaattcctgtcatcagtgttgtccagaacgaattcaaacggcagagtaag
aaccctctccatttccagatgccgatgcataacccggccctgcaccaggtggagctgctc
tactccctgttggtgatcaacagctggtatgacgtcagcctcctgctctgtcaggagtgg
aacgtctccagcttcctggttcgtctccgtaacaacaccaagttccacctgggctctgtg
gtcaacatcaccacctccagtacctcctctggatctcaccccaacagctccatcttcaag
gctgacttctacacctctctgcagggatacctggagtccatcaagaagtccacgtccacg
gtggtcacattcggctgcgacatccgggacatcaagaggatctttagcgtggtggccaag
ctgggcctgatgctgccagagtaccactgggtgttgggggacacgcaggacttggaggag
ctgaggaccgaggggctgccggcgggtctgttggcccacggtaggatgggggctccctcc
ctcgatcattacgtccaggatgggctggagctggtggcccgggtggtggggtcagctgcg
taccgctcccctgagctagccctcatcccctccatcaccaactgcatggatacacagagc
aaccagaacaggaacatgacctcagggaaatatctggccaggtttctgtccaacacgtca
tttgacggtctgagtggtttcatctcgtcccagcaggagacagtgatctcctcagagagc
catcacttcatctggtccctgcaacacgaccccatagggaaccccatgtggaccaggctg
ggccgatggaagcagagcagggtgctcttggactatgctgcctgggccaacaaaaagggc
gcggactggaggtacccatcacggctccatctgcgggtggtcaccctggtggagcacccc
ttcgtcttcacccgggaggtggatgaggacggtctctgtcccgctggtcagctctgcctg
gaccccctcaccaacaacacagccctgctccagtcactcttcctccaggggcttaatgac
agcattcccatgaagtataagaagtgttgctatggttattgcatagacctcttagagaaa
ctggcggaggacataggcttcgacttcgacctgtatattgtaggtgacggaaagtacggt
gggtttaagaacaggcgctggacagggctggtgggggatcttctcagcggagcggcccac
ctggcggtcacatccttcagtataaactcggcccggagcagggttatagacttcacctcc
ccgttcttctccacctctctgggcatcctggtgcggagccgggacacggctgcgcccatc
ggggccttcatgtggcccctgcactggtccatgtggctgggaatcttcgtctctctacac
gtcacggccgtgttcctcaccgtctacgagtggaacagcccgtttgggatgacgccgcga
ggcaggaacagagataaggtgttctccttctcctcggctctgaacgtctgctatgccatc
ctgttcggccgtaccgctgccattaagcctcctaagtgctggacgggtcggttcctcatg
aatctctgggctatcttctgcctgttctgtctctccacctacacagcgaacctggccgcc
gtcatggtgggggagaagaccttcgagcagctctcaggaatacacgatccaaagcttcat
cacccatcacaggggttccgcttcgcgacggtccgggagagcagtgctgaggattacctg
aagaaaagctttccagagatgcacggatacatgacacgatacaatgtaccagcaacccca
gatggaatagaacatctgaagcatgatccacagcaactggatgctttcatcatggacaag
gccttactagactacgaggtgtctatagatgcagactgcaagacactcactgtggggaaa
ccatttgcaattgaaggttatggcatcggcctgcgccagaactcccccctgacctctaac
ctctctgagctggtgagccagtacaagtcagacggcttcatggacatgctgcatgacaag
tggtacaaggtgttgccctgtgggaaacagagctttgcagccacagagaccctccagatg
ggcattaagcatttctcaggcctgtttctgatgctgtgtgttgggctgggtctgtctctc
ctcaccaccctggctgaacacatcatctaccacttcatcatccccagagtcaaggacccc
aagttcaagtactggctgcatactagtcagaggttacatcgagcaatgaactcatctttc
aatgaagataaactgcagaccgtagcaaagccacaagaaaggtgcaacatgggtaacaac
caacaacaacagcagccatgtaacagctcagagtccaactgcaacaggaggaagatccca
cctcaggagtcccagctaaacgtgaagagcctggtccccccgcaggccacctctaacagg
aggacagaccgggtccaggtgggtctacaggccaggaccattcccatgctgcaggagctg
tcagagctggagacacacatccccgtcatcaaacagcagctgcacatcgccatgaagaag
aagagggagctggagcagtaccagcagacatacaagatgacagagtaa
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