Coregonus clupeaformis (lake whitefish): 121583081
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Entry
121583081 CDS
T08357
Name
(RefSeq) zinc finger SWIM domain-containing protein 6-like
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121583081
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121583081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
121583081
NCBI-ProteinID:
XP_045082778
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All DBs
Position
18:complement(31779458..31850425)
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AA seq
1131 aa
AA seq
DB search
MAERVQQPPAKRLCCRLGYNPACRQGQRAGGVLCGGPGSAPGGSGKTHNPESLLDIAARR
VAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEKEICMYSSFNAGGEESGTSGENSEET
QLPFLRGVTLLEGGWVDNVLQVGFHLSGTVTDPATSSQPEMVCSVSVSFDRCKITAVTCS
CGNKDIFYCAHVVALALYRVRKPEQVKLHLPISETLFQMSRDQLQKFVQYLISVHHTEVL
PTAQKLADEILSTNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQGGYHG
SGKQLNLLFSKVREMLRMRDSNGARMLTLITEQFMADPRLALWRQQGTTMTDKYRQLWDE
LGALWMCIVLNPHCKTEQKCWWLRQLRRWNSVEVCPWEDGNHGNDLPNLTHSLPQGAHGN
QELRPHRTVFTRAIEACDLHWQDRHLQHIIASDLYANYCYHDNQDGSLFDARGWPMWHEH
VPTACARVDALRSHGYPREALRLAIAVVNTLRRQQQRQLEHFRRHKKELLHKAVTSITNM
EGWVGHPLDPIGTLFSTLTETGRGAEEGANTCLDLSDCSSVVSRAELQRLPVQRLLGEGE
SYVALAVETALIGLGQQRVMPDGLYAQEKVCRNEEQLLAKLQEVELDDTLVKIFRKQAIF
LLESGPYSGHGEIVHRESVPMHTFTRYLFTSLLPHDAELAYKIALRAMRLPVLESTASSG
DLSRPHHMVSVVPNRYPRWFTLTHIESQQCELASTMLTAAKGDSRKLETVLESIQKNIHS
SSHIFKLGQDAFKIATLMDSLPDITLLKVSLELGLQVMRITLSTLNWRRREMVRWLVTCA
TEVGVYALDSIMQSWYTLFTPTEATSIVATTVMSNTTIVRLHLDCHQQENLASSARTLAL
QCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYTQLFTIARYMEHRGYPMR
AYKLATLAMAHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAVIPLVVKSVKCATVLS
DILRRCTLTTPGLVSALHSRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRH
YSEFIEFLGKARETFLMAQDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgagtccagcagcccccggccaagcggctctgctgcaggctcggctacaac
ccggcatgcaggcaggggcagcgggctggaggagtactgtgtggcggtccggggtctgct
ccagggggatcgggaaaaacacacaaccccgaatcgctgctcgacatcgcggcgcggaga
gtcgcggagaagtggcccttccaaagggtggaggaacggttcgaacggattccagaaccc
gtccagagaaggatcgtgtactggtcctttccgaggagcgaaaaggagatctgcatgtat
tcgtcgttcaacgccgggggagaggagagtggaactagcggggaaaacagtgaagagacc
cagctgcctttcctacggggtgtcactctgctggagggcggctgggtggacaacgtactg
caagtcgggttccatctgagtggtacggtaacagacccggccacatcctctcagcctgag
atggtctgcagcgtgagcgtcagcttcgaccgctgtaagatcaccgcggtaacctgcagc
tgcggcaacaaggacatcttctactgcgcccacgttgtagcgctggccctgtaccgcgta
cggaagcccgagcaggtcaaactgcacctgcccatctcagagacgctgttccagatgagc
cgagatcagctgcagaagtttgtccagtacctgatatcagtgcatcatacggaggtgttg
cccaccgcacagaaactggctgatgagatactgtcaactaactcagagatcaaccaggtc
cacggggccccagaccccacagcaggagccagtgtagatgatgagaactgttggcacctg
gatgaggagcaggtccaggagcaggtgaaactcttcctctctcagggaggataccacggc
tctgggaaacaactcaacctgctgttcagcaaggtgagggagatgcttcgtatgcgtgac
tccaacggtgccaggatgttaacactgatcacagaacagttcatggccgaccctcgcctg
gcactgtggagacagcagggcaccaccatgaccgacaagtacagacaactctgggacgaa
ctaggtgccctgtggatgtgcatcgtgctaaacccccactgtaagacggagcagaagtgt
tggtggctcagacagctgaggaggtggaacagcgtggaagtgtgtccctgggaggatggt
aaccatggcaacgatctgcccaacctcacccactccctgcctcagggtgcccatggcaac
caagagttgcgtccccacaggacggtgttcacacgggccatcgaggcgtgtgatctccat
tggcaggaccgtcacctgcagcacatcatcgccagtgacctctacgccaactactgttac
cacgacaaccaggacggctcgctcttcgacgcacgtggatggcccatgtggcacgaacat
gtcccgacggcttgtgctcgggtggatgccctgcgttcccatggttacccccgtgaagcg
ctgcgattggccattgccgtggtgaacacactacggcggcagcagcagagacaactggag
catttccgcagacataagaaagagctgctccataaagccgtcacctccataaccaacatg
gagggctgggtgggtcaccccctggatcccatcggcacgctgttcagcaccctcactgag
acgggacggggggcagaggagggggccaacacctgccttgacctctcagactgttccagt
gtggtgagtcgtgcggagctgcagcggttgccagtgcagcggttgctaggcgagggtgaa
tcgtatgtggcgctggccgtggagactgctctgattggcttaggccagcagagggtgatg
cctgacgggctgtacgcccaggagaaggtgtgtcgcaacgaagagcagctattggccaag
ctgcaggaagtggagctggatgacacgctggtcaagatcttccgcaagcaagccatcttc
ctgttagagagtgggccatacagtggccacggagagattgtccacagagagagtgttccc
atgcacaccttcacccgatatctcttcacctctctcctacctcacgacgctgaactggca
tacaagattgctctgagagccatgcggttgcctgtgttggagtccacagcctcgtcaggt
gacctgtcgcgaccccatcacatggtgtctgtggtccctaaccgttaccctcgctggttc
acactcacccacatagagtcccagcagtgtgaactggcctccaccatgctcaccgcagcc
aaaggtgatagtcgtaagctggagactgtactagagtccatccagaagaacatccactcc
tcatctcacatctttaaactgggccaggacgccttcaagatcgctactctgatggacagc
ctgccagacatcacactgctcaaagtctcactggagcttgggctacaggtgatgaggata
accctgtctacgttgaactggaggaggagggagatggtacggtggttagttacctgtgcc
accgaagtaggggtgtatgcgttggacagcatcatgcagagttggtacaccctcttcacc
ccgaccgaagccaccagcatcgtggccaccaccgtcatgtccaacaccaccatcgtccgg
ctgcacctggactgtcatcagcaggagaacctggcctcctctgcccggaccctggccctg
cagtgtgccatgaaggacccacagaactgtgccctctctgccctcaccctctgcgagaag
gaccacatcgccttcgagacagcctaccagattgttctggacgcggccaccactgggatg
agctacacacagctgttcacgatagctaggtacatggagcacagggggtaccctatgagg
gcatacaagttagccacgttagccatggctcatctaaacctcagctacaaccaggatacc
cacccagccatcaatgacgtgctgtgggcctgcgctctgagtcactcgctgggaaagaac
gagctggcggccgtcatccccctggtggtgaagagtgtgaagtgtgccacggtgctgtct
gatattttgcggcggtgcacactgaccacgccggggctggtgtcagcgctgcacagccgc
aggaactctgggaagctgatgtcgctggacaaggctccactcaggcagctgctggatgcc
accatcggggcctacatcaacaccacccactctcgcctcacgcacatcagcccgcgccac
tacagtgagttcatagagttcctggggaaggcccgggagacgttcctcatggcccaggat
ggacacatccagttcacacagtttatagacaacctcaaacagatctacaagggcaagaag
aaactcatgatgctggtgagggagaggtttggctga
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