Coregonus clupeaformis (lake whitefish): 121583082
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Entry
121583082 CDS
T08357
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 12-like
KO
K08626
a disintegrin and metalloproteinase with thrombospondin motifs 12 [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121583082
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121583082
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
Reprolysin
TSP_1
ADAMTS_spacer1
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
ADAMTS_CR_3
TSP1_CCN
Reprolysin_3
TSP1_spondin
Reprolysin_2
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
121583082
NCBI-ProteinID:
XP_045082779
LinkDB
All DBs
Position
18:complement(32104126..32184058)
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AA seq
1656 aa
AA seq
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MQCPRVKRVLFLLHSVLFLAASHVEFSLPGSLLSPYAEPGRFLQSQSDVSVVHPVKVFRD
GQFLSHSLAHRFEHGRHKRDLGPLEGRVYYKVNYKGRDLVFNLTVNNYLVSNDYILERRN
GSVNRTEHHTTGENACHLIGTVTDSTNARGTAAISTCEGLKGLFILPEGPHFIEPVQGST
DGAVEGEGPEPHVVYPSISTATQRHKRSSEALDTPSPCGVKDAPSDSLVVERERVDWEGE
QAEEEREREEETAQHRSQRSVSRERWVETMVVADSKLIEYHGSVNVESYVFTIMNMVAGI
FRDASIGNAIHIILVRLILLQGEEKGLKIVHHADTSLASFCAWQKNLNPQSDTHPAHHDV
AVLVTRKDICAGLNQPCETLGLSHLSGMCQPHRSCNINEDSGLPVAFTIAHELGHSFGMH
HDGQGNDCELEGRHPFIMSRQLMYDTSPLTWSSCSKDYITRFLDRGWGFCLNDRPSKKDL
STPLARLGVRYTTQHQCQLQYGPNATYCHEIDNVCQILWCSVNGSCRSKLDSPVDGTRCG
PEKWCISGECVIIGKLPETVNGNWGQWSSWSHCSRTCGAGVQSADRECNNPKPEFGGRYC
TGERRRYRICNTKPCQKAKPTFREMLCSEFDTVPYQNELYEWVPVASPSSPCELHCRPVD
ENFSEKMLDAVTDGTPCFMNNNSRSICVNGVCKEVGCDYGIDSNALEDQCGVCLGDGSSC
ETVQMTFDGGDGFGYVDVGVIPEGARDIVVQEVEEAGNFLALRGQMSEEYFLNGQYIIQW
NGEYKAGGATFYYERSGNLENLTSSGPTKQPVMIQLLYQEKNPGIKYEYTIKRSRQTGNE
VIKSEYRWRHGAWTDCSTTCGLGEQQQPVRCFELEVGVVDESLCDPENRPEDRHRKCKNM
DCPARWWVGGWQLCSATCGSGGGRKRTVLCVRTVAGEERVLHPGDCKQLLKPKSVVPCNS
DLPCGPDWAVGNWSACPVTCGGSVRSRTVTCLTAPKRKCDIETMPRSKSLCALQSCPSAG
LRRRPGPPPKYRRVNPPKRHPTKQPVTHFWGPKSTATPRTSTVTERTTTPINTSTTRPLP
PSSTASDIINVDDHELNLIVGKNGSVEDKEDFFITTSPTEEENGERDMREKEEHEIKEGS
AAGFVFPDSGVRYTPGYDYVVEDVVTTGEEGLIDLDIFTTATSLRTPNQSPPTVTTTRLQ
PTTKPHTPHTSVQTTSLTTPHATRVPLTTSPSIPQTSTGRWAMTTRHYPLTRPNTTHFIN
PSTQRTTMVPHTTPTPLAHTAGVRTTTKAPYHRKQALYPTTEGTFHTRDAPYSTSPSSET
PHPTVRIIKLKKPSETPKNGSAAPCSKKPGPHAKKPASRFKGPSPHSKGKGQEQTPESPL
VTFTSDYSYLNAQEPISVDVFWVVGNWSECSTSCGLGAVWRPVLCSSQQESDCANLERPE
PARTCHLRPCAIWLSGNWSKCPEGCEVVGRRQREVQCVDGQKGRPLRPFHCQALSSRPPS
ILSCRPQPCQPWRTSPWGQCSLSCGGGLRERLVYCPEPQRCSATQRPNNTETCNLQPCSY
WDPQDWEKCSVSCGRGMQHRVVRCVVEDHSSVENSLCDQSSRPDTLRTCNLQECKTNTGP
LCRKNSMSSRFCDKLKLLGRCSLRSIQKQCCVTCRG
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtccgcgggtgaagcgggttctttttctgctacattctgttttgtttttggca
gcaagccatgtcgagttctcgctgcctggcagcctcctctctccatatgcagaaccaggt
cgctttctccagtctcagtcagatgtgtccgtggtccatccagtcaaagttttcagagat
ggacagtttctctcccactctctggcacaccgctttgagcacgggcggcataagcgagac
ttggggcctttggagggacgcgtttattataaggtgaactataagggtcgcgatttggtt
ttcaatctaacagtcaacaactatttggtgtcgaacgattatattctagagagacgaaat
gggagtgtgaaccggactgagcaccataccacaggagagaacgcgtgccacctgatcggc
accgtgacggattctactaatgcgcgagggacagccgcaatcagcacatgtgaaggcttg
aaaggtctgtttatcttgcctgagggaccccacttcattgagccagtccaggggtcaact
gatggtgctgtggagggggagggaccagagccccatgtggtctaccccagcatttccacg
gcaacacaaagacacaaacgcagctctgaggccctggacacacccagcccttgtggggtc
aaagacgcaccaagtgattctctagtggtggaaagagagagggtggactgggagggggag
caggcggaggaggagagggagagagaggaggagacggctcagcatcgctcccaacgctct
gtcagcagagagaggtgggtagagaccatggtggtggcagactctaaactgattgaatac
cacggcagtgtcaacgtagagtcttacgtcttcaccatcatgaacatggtggcagggatc
ttccgtgatgccagtatagggaatgccatccacatcatcctggtccgtctgattctcctg
cagggagaggagaaagggctgaagatcgtccaccatgcagacaccagtctggccagtttc
tgtgcctggcagaagaacctcaacccacagagtgacacacatcctgctcatcatgacgtg
gccgtgctggtcaccaggaaggacatttgtgcagggctgaatcagccgtgtgagaccctt
ggtctgtcccacctgtcagggatgtgccagcctcaccgcagctgcaacatcaacgaagac
tcaggactacctgtagccttcaccatcgcacatgagctgggacacagctttgggatgcac
catgatggccaggggaacgactgtgagctggagggcagacaccccttcatcatgtccaga
cagctgatgtacgacacctccccacttacctggtcctcctgttccaaagactacatcaca
cgcttcctagatcgtggttggggcttctgtctgaacgaccgtccctcaaagaaggatctg
agcaccccactggcccgtctgggggtccgctacaccacacagcaccagtgccaactacag
tacggccccaatgccacctactgccacgagatcgacaatgtgtgtcagatcctgtggtgt
tcagtgaatgggtcctgtcgctctaaactggactcccccgtagatggcactcgctgtggc
cctgagaagtggtgtatctcgggggagtgtgtgatcatagggaagctcccagagacagtg
aatggcaactggggacagtggagtagctggtctcactgttccaggacctgtggagccggg
gtgcagtctgctgacagggagtgtaacaaccccaaaccagagtttggtgggaggtactgt
acaggcgagaggaggcgttaccgtatctgtaacaccaaaccatgtcaaaaggccaaacct
accttcagagagatgctgtgtagtgaatttgacacagtaccctaccagaacgaactctac
gaatgggtccctgtggctagcccatcgagtccgtgtgagctgcactgtcgtccagtggat
gagaatttttctgagaagatgctggatgctgtgacagacggaactccctgcttcatgaac
aacaactccaggagcatctgtgtcaacggagtgtgcaaggaggtgggctgtgactatggt
atagactctaacgctttagaggatcagtgtggagtgtgtctgggtgatggttcctcctgt
gagactgtccagatgacctttgatgggggggatggcttcggctacgtggacgtgggagtg
atcccagagggggctcgtgacattgtggtccaggaagtggaggaggcggggaacttcctg
gctctgcggggtcagatgtcagaggagtacttcctgaatggccagtacatcatccaatgg
aacggggagtacaaggcaggcggagccaccttctactatgagcgtagtgggaacctggag
aaccttacctcctctggacccaccaaacaaccagtcatgatccagttactgtaccaggag
aagaacccaggtataaagtacgagtacaccatcaagaggagccgccagacaggaaatgag
gtcatcaagtcggagtacaggtggaggcatggggcctggacagactgcagcaccacatgt
gggctaggtgagcagcagcagcctgtcaggtgttttgagctggaggtgggcgtggtcgat
gagtctctgtgtgacccagagaaccgcccagaggacagacaccgcaagtgcaagaacatg
gactgccctgccaggtggtgggtggggggctggcagctgtgttctgccacctgtggttca
ggaggggggaggaagcgcacggtgctgtgtgttcgcacggtggcgggggaggagagggtg
ctccaccctggggactgtaaacagctgctcaaacccaaatctgtggtgccctgcaacagc
gacctgccctgtggacccgactgggccgtgggcaactggagcgcgtgcccagtgacatgt
ggtggtagcgtgcgctcccggacggtcacctgcctgaccgcacccaaacgaaagtgtgac
atcgaaaccatgcctcgctccaagtcgctgtgcgccctgcagagctgcccaagcgcaggc
ctccgacgacgtccgggaccaccccctaaataccgccgtgtcaacccgcccaaaagacac
cccaccaagcagccggttacacacttctggggtcccaaaagcaccgctacacccagaacc
agcactgtgactgagagaactacaacccccatcaacacctctaccaccaggcccctccca
ccatcctccacagcttctgacatcatcaacgtagatgaccatgagttgaacctgatagtg
gggaagaatgggagtgtagaggataaggaagatttttttatcacgaccagtcctactgaa
gaggagaacggagagagggacatgagagaaaaagaggaacacgagataaaggaggggagt
gcagctggttttgtgtttccagactcgggggtgaggtacaccccggggtatgactatgta
gtggaggacgtcgtgacaacaggggaggaggggcttatagatttggacatttttaccacg
gcaacctctctcaggactcccaaccaatcaccacccactgtaaccaccaccaggttacaa
cctacaaccaaaccacacacaccacacacaagtgtccaaacaacgtcacttacaacccca
cacgcaaccagagtacccctcactacatccccctcaatcccacaaaccagcactggacgc
tgggccatgaccacccgccactacccccttactcgccccaacaccacccatttcatcaac
ccttccacccaacggacaaccatggtgccccacaccacccctacacccctggcacacaca
gcgggggtgaggactacaaccaaagccccttaccaccgtaaacaagcactgtaccccaca
acagaaggcactttccacactagagatgccccctactccactagtccatcatcagagacc
ccccaccccactgtgaggatcattaagctgaagaagcccagtgagacccccaagaatggc
agcgctgccccatgttctaaaaagccaggcccacatgctaagaagcctgcgtcacgtttt
aaaggcccctcccctcattcaaagggcaaaggtcaggagcagacaccagaaagtcccttg
gtgaccttcaccagtgactatagctacctgaacgcccaggagccaatcagcgtggatgtg
ttctgggtggtgggcaactggagcgagtgttctacgtcatgtggcctgggggcagtgtgg
aggccagtgctgtgtagttcccagcaggaatcagactgtgccaacctggagagaccggaa
ccagctcgcacctgccacctgcgcccctgtgccatctggctgagtggcaactggagcaag
tgtccagagggatgtgaggtggtgggaaggaggcagcgtgaggtgcagtgtgtggatggg
cagaagggacgtccactgagaccgttccactgccaagccctttcctccagaccccccagc
atcctgtcctgtcgtccccaaccctgtcagccctggagaacctccccctggggacagtgc
tctcttagctgtggtggtggattgagggagcggctggtgtactgccctgagccacagcgc
tgtagcgccacccagaggccaaacaacacagagacctgcaacctgcagccctgcagctac
tgggacccacaggactgggagaagtgctctgtgagttgtggcagggggatgcagcatcgc
gtggtgcggtgtgtcgttgaggaccatagctctgtggagaacagtctgtgtgaccagagc
agcaggcctgacacactcaggacatgcaacttgcaggagtgtaaaactaatacaggtccg
ctgtgtaggaagaacagcatgtcgtctcggttctgtgacaagctgaagctgctgggccgc
tgctccctcaggtccatccagaaacagtgctgtgtcacctgtagagggtaa
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