Coregonus clupeaformis (lake whitefish): 121583109
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Entry
121583109 CDS
T08357
Name
(RefSeq) tumor necrosis factor receptor superfamily member 6 isoform X1
KO
K04390
tumor necrosis factor receptor superfamily member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04115
p53 signaling pathway
cclu04210
Apoptosis
cclu04217
Necroptosis
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121583109
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121583109
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121583109
04217 Necroptosis
121583109
04115 p53 signaling pathway
121583109
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121583109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121583109
04090 CD molecules [BR:
cclu04090
]
121583109
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121583109
CD molecules [BR:
cclu04090
]
Proteins
121583109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
121583109
NCBI-ProteinID:
XP_041755257
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Position
1:56319609..56343162
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AA seq
333 aa
AA seq
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MNKYTFLYILCILCMVRLATPFKAERSSQDNLITSKLRTKRQSCQDGTYQHEGMACCLCA
AGQHLKSHCSVRPEDRTCVYCEADRTYNSDPNSLDSCEPCTSCDPKVNLEMEKKCTIFRD
SVCRCQQGHYCNKGKEHCRACYPCTTCGDEGIKVACSATNNTICHAVKEQGGSTLAAVVV
LIAVLLVALFVPIYLWRKKKYCFGPNGGSTELPNRSSEVAEEMHPLRGVDLRPHLPEIAN
TLGWKDMKQVAEGSGMKHTAIECHQLDFPNDSQQQCSSLLRAWVEKEGMATASEKLVNTL
HRMKKKAKAEDIKAIISSKEHGVTGENSGLEQV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtatacttttttatatatcctgtgcattttgtgtatggttcgtttagctaca
ccattcaaagcagagcggagttcccaagacaacttaatcactagcaaattgcgcaccaaa
aggcagagttgtcaagatggcacttaccagcatgagggaatggcctgctgtctctgtgct
gctggccaacatctgaagagccactgcagtgtgaggccagaggataggacctgtgtttac
tgtgaggcagacaggacctacaacagtgaccccaactccctggactcctgtgagccctgc
acttcctgcgaccctaaagtcaatctggagatggagaaaaaatgcaccatcttcagggac
tcagtatgtcgatgccagcagggccactactgtaacaaggggaaggagcactgcagggcc
tgctacccgtgtaccacatgcggggatgagggcatcaaggtagcctgtagcgccactaac
aacaccatatgccatgccgtcaaagaacaaggaggaagcactttggcagcagtagttgtc
ctgattgctgttcttcttgtcgctttgtttgtgcctatttacctgtggcgaaagaagaaa
tattgttttgggccaaatggtggttcgaccgaactgcccaaccggagttcagaggtagcg
gaggaaatgcatccacttagaggtgttgacctcaggccacacctcccagaaatcgctaac
accttggggtggaaggacatgaaacaggtggccgagggcagcgggatgaaacataccgcc
atagaatgccaccagctggactttcccaatgactcccagcagcagtgctccagcctactg
agggcctgggtggaaaaggaggggatggccacagcctctgagaaactggtcaatactcta
caccgcatgaagaaaaaggccaaggcagaggatatcaaggctatcatcagcagcaaggag
catggcgtcacaggggagaactcagggttagaacaggtgtag
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