Coregonus clupeaformis (lake whitefish): 121583174
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Entry
121583174 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 43-like
KO
K10514
zinc finger and BTB domain-containing protein 43
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121583174
04121 Ubiquitin system [BR:
cclu04121
]
121583174
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121583174
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121583174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_15
BTB_KLHL33
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
121583174
NCBI-ProteinID:
XP_041755308
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Position
15:8789664..8798597
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AA seq
471 aa
AA seq
DB search
MESEGNVLRVDFPNFSGTLLQKLNQQRQRGQLCDIIVVIQGHQYRAHRAILAASSPYFCD
QVLLKNSARCVLPDVMHPCVFERLLLSCYTGTLHLPAGEVVAFLTAASFLQMWHVVDKCT
ELLEVVGSGTLVQKSFGGLRDRPSPGDSSYHSPGDGAMGLEDGGGGGAVEGFAKMEMDQL
LENSFSPPTLENNSTQPGGSCSPPVDHDGSGSEAASQDGDDEEGGEGDYQYSRPAYVPPS
IMGHRKWVHVKSERRADCRGDGALFSGDPAVTDPEQLNLTHFQASASRSSLDHSIDEKPV
AQQEENLEEDPLDFYGTSMEGFSTDKADGTPLGLKDDMLGGATGCEESGGGGEGTPGGLQ
EETSHSGFASVVYKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCAVCGKSFKMKHHLVG
HMKIHTGVKPYECSLCAKRFMWRDSFNRHTSSCTRVHQARCAVNEQAAQIC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgaggggaatgtgctccgcgtggacttcccaaacttctccggaaccctgctg
cagaagctcaaccagcagcggcagaggggccagctctgtgacatcatcgtggtcatccag
ggccaccagtaccgtgctcaccgggccatcctggccgccagttcgccctacttctgcgac
caagtgctccttaaaaacagcgcccgctgcgttttacccgacgtcatgcacccgtgcgtg
ttcgaacgcctcctcctgtcttgctacacgggcaccctccacctaccggccggcgaggtg
gtagctttcctcacggcagctagcttcctccagatgtggcacgtggtggacaagtgcact
gagctcttagaggtggtaggaagcggcacattagtgcagaagtcttttggtgggctgagg
gacaggccttcccctggggacagcagctaccacagccctggggacggcgcaatgggcctg
gaggacggcggaggaggaggagcagtggagggctttgccaaaatggagatggaccagctc
ctggagaacagcttctccccacccactctggagaacaacagcacccagcccggcggaagc
tgctcgccaccggtcgaccacgacggctcaggtagcgaggccgccagccaggatggggat
gatgaggagggtggcgagggggactaccagtactccagaccagcctacgtcccgcccagc
atcatgggccacaggaaatgggtccacgtgaagtcggaaaggcgtgcagattgcaggggc
gacggggccctctttagcggggaccctgcagtcactgaccctgagcagctgaaccttacc
cacttccaggcctcggccagcaggagctccctggaccacagcatagatgagaaaccggtg
gctcagcaggaggagaacctggaggaggacccactggacttctatggtacctccatggag
ggcttctccaccgacaaggccgacgggacaccgcttgggctgaaagatgacatgctagga
ggggcaactgggtgtgaggagagtggtggcgggggggaaggaacccctggtggcctccag
gaagagacctcccactcgggcttcgcctcagtggtctacaagctgtacccctgccagtgt
ggcaagagcttcacccacaagagccagcgggaccggcacatgagcatgcacctgggcttg
aggccgtacggctgcgccgtgtgtggcaaaagtttcaagatgaagcaccacctggtgggc
cacatgaagattcacacgggcgtcaagccctacgagtgcagcctgtgcgccaagcgcttc
atgtggcgggacagcttcaaccgccacacgtcctcctgcaccagggtccaccaggcccgg
tgcgcagtcaacgagcaggccgcccagatctgctga
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