Coregonus clupeaformis (lake whitefish): 121583192
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Entry
121583192 CDS
T08357
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03030
DNA replication
cclu03082
ATP-dependent chromatin remodeling
cclu03410
Base excision repair
cclu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121583192 (pole3)
03410 Base excision repair
121583192 (pole3)
03420 Nucleotide excision repair
121583192 (pole3)
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121583192 (pole3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121583192 (pole3)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121583192 (pole3)
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121583192 (pole3)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121583192 (pole3)
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
121583192 (pole3)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
121583192 (pole3)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
121583192 (pole3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
CIS_TMP
PPP4R2
SpoU_methylase
DUF4746
RNA_pol_3_Rpc31
NOA36
Pox_Ag35
CDC45
PFF1_TM
DDHD
Motif
Other DBs
NCBI-GeneID:
121583192
NCBI-ProteinID:
XP_041755320
LinkDB
All DBs
Position
15:6982533..6989998
Genome browser
AA seq
146 aa
AA seq
DB search
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANNFAMKAK
RKTLNATDVMSAMEEMEFERFLQPLRESLEAYKKGQKGKKEASEQKRKDAKEKKNDKSRE
EEEEEEERMEEDQEAENEVEEEEVEN
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagacccgaggacctcaatctacccaatgctgtcatcacgcgcatcatcaag
gaggcgctaccagatggggtgaacgtgtcaaaagaagccaggcgagccatatctcaagct
gccagtgtattcgtcctctatgcaacatcttgtgcaaacaactttgccatgaaagccaaa
cggaaaactctaaacgcaacagatgtgatgtctgcgatggaggagatggagtttgaacgc
ttcttgcagcctctacgtgaatctttggaggcttacaagaagggccagaaggggaagaaa
gaggcatcggaacaaaaacgcaaagacgcaaaggagaaaaagaacgacaagagcagggag
gaggaagaggaggaggaagagcgcatggaggaagaccaggaagcagagaatgaggttgaa
gaggaagaagttgagaattga
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