KEGG   Coregonus clupeaformis (lake whitefish): 121583192
Entry
121583192         CDS       T08357                                 
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03030  DNA replication
cclu03082  ATP-dependent chromatin remodeling
cclu03410  Base excision repair
cclu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121583192 (pole3)
   03410 Base excision repair
    121583192 (pole3)
   03420 Nucleotide excision repair
    121583192 (pole3)
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    121583192 (pole3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cclu03032]
    121583192 (pole3)
   03036 Chromosome and associated proteins [BR:cclu03036]
    121583192 (pole3)
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121583192 (pole3)
Enzymes [BR:cclu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     121583192 (pole3)
DNA replication proteins [BR:cclu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    121583192 (pole3)
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    121583192 (pole3)
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      121583192 (pole3)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C CIS_TMP PPP4R2 SpoU_methylase DUF4746 RNA_pol_3_Rpc31 NOA36 Pox_Ag35 CDC45 PFF1_TM DDHD
Other DBs
NCBI-GeneID: 121583192
NCBI-ProteinID: XP_041755320
LinkDB
Position
15:6982533..6989998
AA seq 146 aa
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANNFAMKAK
RKTLNATDVMSAMEEMEFERFLQPLRESLEAYKKGQKGKKEASEQKRKDAKEKKNDKSRE
EEEEEEERMEEDQEAENEVEEEEVEN
NT seq 441 nt   +upstreamnt  +downstreamnt
atggcagaaagacccgaggacctcaatctacccaatgctgtcatcacgcgcatcatcaag
gaggcgctaccagatggggtgaacgtgtcaaaagaagccaggcgagccatatctcaagct
gccagtgtattcgtcctctatgcaacatcttgtgcaaacaactttgccatgaaagccaaa
cggaaaactctaaacgcaacagatgtgatgtctgcgatggaggagatggagtttgaacgc
ttcttgcagcctctacgtgaatctttggaggcttacaagaagggccagaaggggaagaaa
gaggcatcggaacaaaaacgcaaagacgcaaaggagaaaaagaacgacaagagcagggag
gaggaagaggaggaggaagagcgcatggaggaagaccaggaagcagagaatgaggttgaa
gaggaagaagttgagaattga

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