Coregonus clupeaformis (lake whitefish): 121583263
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Entry
121583263 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5-like isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121583263
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121583263
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121583263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121583263
NCBI-ProteinID:
XP_041755380
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All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MLRAGPAATTLILLLSYCFCHLCHSLGIHKLSSYAKTEDKLFKNLFRNYQKWVRPVEYLN
GTVRVRFGLAISQLVDVDEKNQLMTTNVWMKQEWLDMKLRWNLDDYLGITTIRVPSDSIW
IPDIVLYDNADGRFEGSVTKAVVKYDGTITWTQPANYKSACIIDVTFFPFDLQNCSMKFG
SWTYDGSQVDILLEDFHVDKRDYFDNGEWEIVKATGSRGLRMDGSCYFPFITYSFIIRRL
PLFYTLFLIIPCIGLSFLTILVFYLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPSSSKV
IPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHHGMAPWVRRIFLHRLPKLLCMHSH
VDRYANPGGARAGLAGRECAGLAGREGAVGGIMKGSSPESTPHLSSRNNLQAALDSIRYI
TMHVVKENEVREVVQDWKFVAQVLDRVFLWTFLLVSVLGSALLFIPVIYKWANIIVPNHA
GSSG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgctgagagctgggccagcggccaccactctaatcctgctgctgtcatactgcttctgc
cacctgtgtcactccctgggaatccacaaactgtcctcctatgccaagacagaggacaaa
ctgttcaagaacctcttcagaaactaccagaaatgggtgaggcctgtagaatacctcaac
ggcacagtacgggtcagatttggactggccatctcccagctagtggacgtggacgagaag
aaccagctgatgacaaccaatgtgtggatgaaacaggaatggttggacatgaagctacgc
tggaaccttgatgactacctgggcatcactaccatcagagtcccgtcagactccatctgg
atcccagacattgtgctctatgacaatgccgatggacgttttgagggctctgtcaccaag
gctgtggtcaagtacgatggcaccatcacctggacacagcccgctaactacaagtcagcc
tgcatcatcgatgtcaccttcttcccctttgacctgcagaactgctccatgaagtttggc
tcctggacctatgatggctcacaggttgacatcctcctggaggacttccatgtggacaag
agggactactttgataatggtgaatgggagatagtgaaagcgacaggtagccgtggtctg
aggatggacggatcctgctacttccccttcatcacctactcctttataatccgtagactg
ccgctcttctacaccctgttcctcattatcccctgtattggcctttccttcctcaccatc
ctggtcttctaccttccctccaatggcggggagaagatctccctgtgcacctctgtgctg
gtgtccctcaccgtcttccttctcgtgatcgaggagatcattccgtcctcctccaaggtc
atccctctgatcggggagtacctggtgttcaccatgatctttgtcacgctctccatcgtc
atcaccgtcttcgccatcaacatccaccaccgctcctcgtccacgcaccatggcatggcg
ccctgggtgcgccgtatcttcctgcacaggctgcccaagctgctgtgtatgcacagccat
gtggaccgctatgctaaccctggcggggccagggcaggactggcagggagagagtgtgca
ggactggcagggcgagagggggcagttgggggcattatgaagggctcttcaccagagtcc
acccctcatctctcctctaggaataacctgcaggctgctttggactctatccgctacatc
accatgcatgtggtcaaggagaacgaggtcagagaggtggtgcaggactggaagtttgtg
gctcaggttctggaccgtgtgttcctgtggaccttcctcctggtctcagttctgggctct
gctctactcttcatccctgtcatctacaaatgggccaacatcatcgtccccaaccatgca
ggcagcagcggataa
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