Coregonus clupeaformis (lake whitefish): 121583329
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Entry
121583329 CDS
T08357
Symbol
htr1ab
Name
(RefSeq) 5-hydroxytryptamine (serotonin) receptor 1A b
KO
K04153
5-hydroxytryptamine receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121583329 (htr1ab)
04082 Neuroactive ligand signaling
121583329 (htr1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121583329 (htr1ab)
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Biogenic amine
Serotonin
121583329 (htr1ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
7tm_4
DUF8525
Motif
Other DBs
NCBI-GeneID:
121583329
NCBI-ProteinID:
XP_041755442
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Position
15
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AA seq
414 aa
AA seq
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MEERNNSTAAWFLFDFKNETSTADSEEVKLSSQIFPSFLLAALILCAIFGNACVVAAIAL
ERNLQNVGNYLIGSLAVTDLMVSVLVLPMAALYQVLNRWALGQVPCDIFISLDVLCCTSS
ILHLCAIALDRYWAITEPIEYMKKRTPRRAAVLISVTWFVGFSISVPPMLIMRSQPSSKA
EDIANPEQCVISRDPWYTIYSTFGAFYIPLILMLVLYGRIFKAARFRIRRTVRKTDKKKV
SDSRLALSPALFHKRTNGDPSKSWKRSVEPKPTLCVNGAVKHAEDGESLEIIEVPSNSKS
NLPLPNTPNSEPLFESRHDKNMEAKRKMAMARERKTVKTLGIIMGTFIFCWLPFFIVALV
MPFCQSCQMPKWLEDVINWLGYSNSLLNPIIYAYFNKDFQSAFKKIIKCHYCKT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagaaacaactcgacggccgcatggtttctatttgattttaaaaacgaaacc
tcgacagctgattcagaggaggtgaaactaagttcccaaatcttcccgtcctttctcctg
gccgcgctcattctctgtgccatatttggtaacgcgtgtgtggttgcagctatcgccctg
gagagaaatcttcagaatgtagggaactatctgatcgggtctctggccgtgactgatctg
atggtatcagttctggtgttgccaatggcggccctttaccaagtcttaaacaggtgggct
ctcggacaggtaccttgtgacatttttatctctttagatgtgttatgttgtacatcatcc
atactgcacctgtgcgccatcgccttggacaggtactgggccattaccgaacccatagag
tatatgaagaagaggacgcccagaagagcggcggttctgatcagtgtcacttggtttgtc
gggttctctatctctgttccacccatgttgatcatgcgttcccagccgagtagtaaggcc
gaggacatagcaaatcccgagcagtgcgtcattagtcgagacccctggtacacaatctac
tcaacattcggcgcgttctacattccgttgatactcatgttagtcttgtatggacggata
ttcaaagccgccaggtttagaatcaggagaacagtgcgtaaaacagataaaaagaaagtg
tctgattctcgtttggcactgtcccctgctctgttccacaagaggaccaacggggacccg
agtaaaagctggaagaggagcgtggagcccaaaccgaccctgtgcgtaaacggcgccgtc
aagcacgcggaggacggcgagtcgctggagatcatcgaggttcccagcaactcgaaaagc
aacctgccactccccaacacccccaactccgaaccgctctttgagagcagacacgataag
aacatggaggcaaagagaaagatggccatggccagagagcgcaaaactgtaaagacgctg
ggtattattatgggcacttttatattttgttggctgcctttctttatcgtcgccctggta
atgcccttttgccagtcgtgccaaatgccaaagtggctcgaggacgtcattaactggctc
gggtactccaactccctactgaatcccataatttacgcatacttcaacaaagacttccaa
agtgcttttaagaaaataataaaatgtcactactgcaaaacataa
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