Coregonus clupeaformis (lake whitefish): 121583337
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Entry
121583337 CDS
T08357
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121583337
Enzymes [BR:
cclu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
121583337
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121583337
Prokaryotic type
121583337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
121583337
NCBI-ProteinID:
XP_041755450
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MMSEESANMLTKPLKRVEEGNGESGENGHIRKKLKSVEQTGDERKHPKRKVVLLLAYSGK
GYYGMQRNAGSSQFKTIEDELVTALIKSGCIPDNHGDDMKKMSFQRCARTDKGVSAAGQV
VSLKLWMIEDVMEKINSNLPPQIRVLGLKRVTGGFNSKNSCDARTYSYMLPTVAFSPKDY
DTKNSAAFRLEPETLQRVNRLFGSYKGTHNFHNFTSQKAARDPSARRYITEMSCGEPFVR
GGAEFAEITVRGQSFMMHQIRKMIGLVIAVVKGYSGDEVLKRSWGEEKVDVPKAPGLGLV
LEKVHFDRYNKRFGGDGLHECLEWTEEEQAILAFKEEHIYPSIVETECQEGSMANWMATL
PIHDFEATATGAQDKDREQDDEEGNRSDSAL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgaagagtcagcaaatatgctgaccaagccactgaaacgagtggaggaggga
aatggagagtcgggtgagaatggacacatcagaaagaagctgaagtctgtagaacagact
ggcgacgagaggaaacaccccaaaagaaaagtggtcctgcttttggcatattcaggcaaa
ggttactacggtatgcagagaaatgctggatcctcccagttcaaaaccattgaggatgag
ctggtcacagcactgattaagtctgggtgcatcccagacaaccatggagatgacatgaaa
aaaatgtcgttccaaagatgtgcgagaacagacaagggtgtttctgcagcaggtcaagtg
gtctctctaaaactgtggatgattgaagacgtaatggaaaagatcaactccaatcttcca
ccacagatcagagtgctgggtctgaaacgagtgactgggggcttcaattctaaaaacagc
tgtgatgcccgcacatactcctacatgctccccactgtggccttctccccaaaggactat
gacaccaagaattccgctgcattccgcctggagccagagacactgcagagagtaaaccgg
ctgtttggcagctacaagggcacccataactttcacaacttcacctcccagaaggctgcg
cgggaccccagcgcccgccgctacatcacagagatgtcctgtggcgagccctttgtgcgc
ggcggcgcagagttcgccgagattaccgtgcgtggccagagcttcatgatgcatcagatc
cggaagatgattggcctggtgatagctgtggtgaagggctattcaggggacgaggtgttg
aagcgaagctggggcgaggagaaagtggatgtgcctaaggcccccgggctgggcctagtg
ctggagaaagtgcactttgacaggtacaacaagcgttttggtggggacggcctccatgag
tgcctggagtggactgaagaggagcaggccatcttggccttcaaggaggagcacatctac
cccagcattgtggagaccgagtgccaggaagggtccatggctaactggatggccacactg
cccatacacgactttgaggccactgcaacaggagctcaggataaggatagggagcaggat
gatgaggagggtaatagatcagattctgcactttga
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