Coregonus clupeaformis (lake whitefish): 121583382
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Entry
121583382 CDS
T08357
Name
(RefSeq) substance-P receptor-like
KO
K04222
tachykinin receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121583382
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121583382
04082 Neuroactive ligand signaling
121583382
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121583382
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Peptide
Tachykinin
121583382
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GFIT
Motif
Pfam:
7tm_1
7tm_4
Motif
Other DBs
NCBI-GeneID:
121583382
NCBI-ProteinID:
XP_041755494
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Position
15:17213850..17226468
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AA seq
426 aa
AA seq
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MDSLLNTTDYYPSVNATNGSGLNDTEGYNQFVQPVWQIALWAIAYCSMVCVSVIGNLVVI
WIILAHKRMRTVTNYFLVNLAFAEASMSAFNTVINFAYSVHNEWYFGLGYCRFHNFFPIA
AVFTSIYSMTAIALERYMAIIHPLRQRLSSAETCVVIGVIWVLALLLAFPQYYYSATDQL
PGRTVCYIQWPEYTNDTTMDFNKMYSVSVVLLYYFLPLCIMGCAYLVVGLSLWVGTIPGD
STHRYREQLIAKRKVVKMMIVVVCTFAVCWLPYHIYFLLHQFHPDPMQLFEWRYIQQVYL
AVLWLAMSSTMYNPIIYCCLNDRFRAGFQQVFCWCPCVPATSYGGLELKSTRYLQTQVSV
YRASRMETSMSTVLQPTEEERCGAEQPASPPIIQTTLELTSTSNGSASRSALNSPDSPYY
GRHNMA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggactcgctgttgaacaccacggattactacccttccgttaacgccactaacggctcc
ggtttgaacgacacagagggctataaccagttcgtacagccggtgtggcagatcgctctc
tgggccatcgcctactgcagcatggtgtgcgtctccgtgatcggtaacctggttgtcatc
tggatcatcctcgcgcacaaacgcatgaggaccgtgaccaactactttctggtgaaccta
gcctttgcagaggcgtctatgtctgccttcaacacagtgataaactttgcctacagcgtc
cataacgagtggtactttggtttgggctactgtcgcttccataactttttccccattgca
gcggtcttcaccagcatatactccatgaccgccatagcactggaaaggtacatggctatc
atccaccccctgaggcagaggttgtcttcagcagagacctgtgtagtgatcggagtgatc
tgggtgttagctctactgttggccttcccccagtactactactcagctactgaccagctg
cctggtaggactgtctgttacatccaatggcctgaatacaccaatgacacaaccatggac
ttcaataagatgtactctgtgtctgtggtgttgctgtactacttcctgccgctgtgcatt
atgggatgtgcctacctggtggtgggcttgtccctgtgggtggggactatccctggagac
tccacccaccgctaccgagagcagctaatcgccaaacgcaaggtagtgaagatgatgatc
gtggtggtgtgtacttttgcagtgtgctggctgccttaccacatctacttcctgctccat
cagttccaccctgaccccatgcagctgtttgaatggcgctacatccaacaggtctacctg
gctgtcctgtggctggccatgagctccaccatgtacaaccctatcatctactgctgtctc
aacgacaggttcagggcaggctttcagcaggtgttctgttggtgtccgtgtgttcctgcc
acctcctacgggggactggaactcaagtccacccgctacctacagacccaggtgagtgtg
taccgggccagccggatggagaccagtatgtcgacagttctgcagcccactgaggaggag
cgctgtggggcagagcagccagctagcccccctatcatccagacaaccctggagctcacc
tccacctccaacggctcagcctcacgatcagcccttaactcccccgacagcccttactac
ggcagacataacatggcctag
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