Coregonus clupeaformis (lake whitefish): 121583383
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Entry
121583383 CDS
T08357
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121583383
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121583383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121583383
Membrane trafficking [BR:
cclu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
121583383
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GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF8415
MA3
Motif
Other DBs
NCBI-GeneID:
121583383
NCBI-ProteinID:
XP_041755495
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Position
15:complement(17331187..17345041)
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AA seq
198 aa
AA seq
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MKLFSLSVLYKGTTKSNLLKAAYDLSSFSFFQKSSVQEFMTFTSDLIVQRSSIGSRASIK
EQEYLCHVYVRNDSLGAVVIADGEYPSRVCFTLLDKVLEEFSRQVSSIDWPSGSPATVHY
TALDSYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcagtctgagtgtgctgtataaagggaccaccaagtctaacctactgaaa
gctgcctacgacctgtcatccttcagcttcttccagaagtccagtgttcaggagttcatg
acgttcaccagtgacctcatagtgcaacgatcatctatagggagccgagcctctatcaaa
gaacaagagtacctgtgtcacgtgtatgtgaggaatgactccctgggtgcggtggtgatt
gctgacggagagtatccctctagagtgtgcttcaccctactggataaggtgctggaggaa
ttttccagacaggtgagcagtatagactggccctctggttctcctgccactgtccactat
actgccctggatagctacctcgccaagtaccagaatcctcgggaggcggacgcaatgagt
aaagtacaagctgagctggacgaaaccaaaatcattctgcacaacactatggaaagtctg
ttggagagaggagagaagctggatgatctggtccagaagtctgaacacctggggaaccag
tctaaagccttctacaagacagcgcggaagcagaactcttgctgtgaggtcatgtga
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