KEGG   Coregonus clupeaformis (lake whitefish): 121583383
Entry
121583383         CDS       T08357                                 
Name
(RefSeq) synaptobrevin homolog YKT6
  KO
K08516  synaptobrevin homolog YKT6
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130  SNARE interactions in vesicular transport
cclu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    121583383
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121583383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121583383
Membrane trafficking [BR:cclu04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    121583383
SSDB
Motif
Pfam: Longin Synaptobrevin DUF8415 MA3
Other DBs
NCBI-GeneID: 121583383
NCBI-ProteinID: XP_041755495
LinkDB
Position
15:complement(17331187..17345041)
AA seq 198 aa
MKLFSLSVLYKGTTKSNLLKAAYDLSSFSFFQKSSVQEFMTFTSDLIVQRSSIGSRASIK
EQEYLCHVYVRNDSLGAVVIADGEYPSRVCFTLLDKVLEEFSRQVSSIDWPSGSPATVHY
TALDSYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaagctcttcagtctgagtgtgctgtataaagggaccaccaagtctaacctactgaaa
gctgcctacgacctgtcatccttcagcttcttccagaagtccagtgttcaggagttcatg
acgttcaccagtgacctcatagtgcaacgatcatctatagggagccgagcctctatcaaa
gaacaagagtacctgtgtcacgtgtatgtgaggaatgactccctgggtgcggtggtgatt
gctgacggagagtatccctctagagtgtgcttcaccctactggataaggtgctggaggaa
ttttccagacaggtgagcagtatagactggccctctggttctcctgccactgtccactat
actgccctggatagctacctcgccaagtaccagaatcctcgggaggcggacgcaatgagt
aaagtacaagctgagctggacgaaaccaaaatcattctgcacaacactatggaaagtctg
ttggagagaggagagaagctggatgatctggtccagaagtctgaacacctggggaaccag
tctaaagccttctacaagacagcgcggaagcagaactcttgctgtgaggtcatgtga

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