Coregonus clupeaformis (lake whitefish): 121583386
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Entry
121583386 CDS
T08357
Name
(RefSeq) pentatricopeptide repeat-containing protein 2, mitochondrial
KO
K17711
pentatricopeptide repeat domain-containing protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121583386
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121583386
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Gene cluster
GFIT
Motif
Pfam:
MRP-S27
PPR_2
PPR
TPR_IF140_C
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
121583386
NCBI-ProteinID:
XP_041755500
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Position
15:complement(26890935..26896591)
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AA seq
383 aa
AA seq
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MALGRIGGCIRILLHDVPAKGLLRGRIQSDCMVCRVGAKRHLLSEDVVKLQEFQQRKLAV
AHQVSGSKSHYLEVFNRKLKKNELILKDELKLLLHLCQSAEDMVTARGAIYRYHEENSNV
SFGEFKFGPLFMRLCYELGLEEMAAATLTDKDMRGFFSDSTSFNIAIDMLFMKGLYESSL
DVLRDMKNQGVPFNKDTFTLATGTCYKLNTPESYRICTALIEEGQTKGHIMPRHAYFFTV
ALALRQNDVEKAQSMFGQIMSTDSRICQNLKVLILAMSGAVKESLSVLTLALGSSSPAFI
KKPEFAQEVVDLVRLRSEDSPLMASVEQAVSRLQQAGQVTQRNLDEMLCHTPTGKRRMPM
GIMEERRISRRTLRPLQSTLLSE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttggcaggatcggcggctgcatccgaatactgcttcatgatgttcccgcaaaa
ggattacttcgtggccgcatacaatcggactgtatggtatgcagagtaggagcaaaaagg
catctattgtcagaggatgttgtcaaactacaagaatttcagcagcggaaactggcagtg
gctcatcaagtgtccggatcaaaaagtcattatttggaggtattcaatcggaagctaaag
aagaacgagctcatattgaaggatgagctgaagctgcttctacacttatgccaatctgca
gaggacatggtcacagccagaggcgccatctataggtaccacgaagagaacagtaacgta
tcatttggagagtttaagtttggtcctctgttcatgaggctgtgctatgagctggggctg
gaggagatggctgctgccacactgacagacaaggacatgagaggattcttctcggactca
acctccttcaatattgccatagacatgttgtttatgaaaggattatatgagagttctctg
gatgtacttagagacatgaagaaccaaggtgtgccattcaacaaggacacgttcacatta
gcaactggtacctgctataaactgaacaccccggagtcctatagaatctgtactgccctg
atagaggagggacagaccaaaggacacattatgcccagacatgcctacttcttcactgtg
gctctagcacttagacagaatgatgttgaaaaggcacaatccatgttcggtcagattatg
agtactgacagcagaatatgtcaaaatctcaaagtgctgatactggctatgtcaggagct
gtgaaagaatcactctctgtcctgaccttagctttgggatccagcagccctgcatttata
aagaagcctgaattcgcacaggaagtggtggacctggtgcgtctgcggagcgaggacagt
cctctgatggcgagcgtggagcaggcagtgtcccgcctccagcaggcgggtcaggtgacc
caacggaacctggacgagatgttgtgtcacacccccacggggaagaggaggatgcccatg
gggataatggaggagagacggatcagccggaggactctgaggcctctgcagtccactctg
ttgtcagagtga
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