Coregonus clupeaformis (lake whitefish): 121583581
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Entry
121583581 CDS
T08357
Symbol
il16
Name
(RefSeq) pro-interleukin-16
KO
K22628
interleukin 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121583581 (il16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121583581 (il16)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Interleukins
121583581 (il16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121583581
NCBI-ProteinID:
XP_045075039
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MPQRYSYQRRKASTAAARRMERRGRDSGKSNTTNASHSHRHRSKKLAMLSRSLILCHSRA
SDDCPSPEERQPGEGWEGDGGLGRDGEGDREGERYRKKIQEGPQESGGTMQASTQPPVEA
TNTLRATGEHKRNMRRSFSIKESSIWRMCVTTGAGEEGLGLQTGDSSHQTEDKEPSVERG
RNGGGEGHRSSYLQSTDKLAPFNGQCLNGHARTEVERQAKNGHAARTEGEGGRQAACRNS
HITAYSEESSTCEQQPHSPEGVTLADPLSLADPMAVANYTETEHTGNNNHLRLAIPEMNE
DRGWDTERTGHCLQGQTVCKRTRSNSTSVHPYWIGDLDTIILKTPELYQSNTHGTAGFFG
SRKSLSQQLEFPHNPNQPVPRPSRSLSSAHLVHSCSNVQAFIICNIVLMKGHGKGLGFSI
VGGRDSMYGPMGIYVKTIFPGGAAAADGRLQEGDEILELNGESLHGLTHEDALQRFKQIK
KGLLTLAVRTSLRVGALCGQAAVAQLCRSRSLSSSTGMARVSTDMGDYNYLSGVTAANTH
TNTNTLPPLAKPRDRVMMEITLHKEAGVGLGIGLCCVPSGDGCRGIYIHTLSPGSVAHMD
SRLRCGDEIMEINNTVVYNMVLNDVYTVLSQCAPGPVQIIISRHPDPKVSEQQLNDAIAQ
AVETSKLKQDASQWSINGLRRSDPCSHSRGKCERCVARSFSQLTARRAQKNMTRSCSDSN
TYNQNPHHNHQHNCCPGPGTNLVNGQTLTVPNHNTHHNLMGRVHSLDIPMGSTAEPWCDN
RLSALVCPVPDDDYNVPYNSPAANLSSQRTLDLATRGNKNRPKALAPPRRYSRHQDVTSE
EGATGGLPDSNGSSRGSPVREDGWSPTHTNCQEVESERVREREREREHSGGSGENLTHSD
AHSAAITDCPRYSSCTEDRPHTGAESALHLCSQSKRPGLRRQARVEQLTPEKLHDPWVRI
SDSPPDLGGPGDPHHNQSPNHPSPHQHNTHSHNSTHQQQTHHLSSHHDATHTPSQPVAMS
QRSEFPELPELNSTSDHHTTPDPTTPSTPASLISTPSPMTEDPPGVRKAPPVAPKPMWNR
QSLRSIRNGRPQPELAKPLDNRGGGTTFGVSLRPTSSAANLSIKQKIHSFETFSSPDGKG
QERWGNNRRPLAPSTSLPLKDKAPIRSDPPLLEENGTIQHDMGKGAKVTSPISDEEKDGR
VSSSPLAASPHSTHPPSPASHPSPPTCFSLLPTPHPASELQTPVELQTPVEETTDTNTEI
SDSPSPEDTTTTPSTLEASLPRPTPETEPLDEAVEASVSPLWPGAQERRGEGDQSHAQAQ
GKQASLRTRSLPLPASPSPDGSTTLRGLEGESLGKILSFSKQVSHALMRSMHSLLPSPCP
TVPGNPGSDPPPASPLVSSPEEPDPAQNTPLSPGPDSNENSFSVSLSDLRQCTIERGEEG
RDLVSRPSLSACAHSVISAIPPQQIQTMIQEVKALDEETLKQFEHIHVVILHKEEGAGLG
FSIAGGIDLESKATTVHRVFPHGLAAQEGTVEKGDEVLSINGQTLRGATHADATATLRQA
RTMRLAVVVVSKGREGGGGGGEEGGNKAGDPSISSSSTDLNPTVEDGGAMLTVELETGGG
GRGISLEGRIFKGGAAEQSGLQSGDELLQVQSSSLQELSRFEAWNIVKALPEGHITLVIR
RRKEDEAEGSA
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgccccagagatactcctaccagaggaggaaagccagcacggcagcagctcggaggatg
gagaggcgaggcagggactctgggaagagcaacaccaccaacgctagccacagccaccgc
caccgctccaagaagctagccatgctctccaggtctctgatcctctgtcactccagggcc
agtgatgactgccccagccccgaagagagacagccaggggagggctgggagggagacggg
ggcttggggagagacggggagggggacagagagggggaaaggtaccggaagaagatacag
gaaggaccccaggagagtggaggaactatgcaggcatctacacagccacccgtagaggcc
accaacacactcagggctacaggagaacacaagaggaatatgaggaggtccttcagtatc
aaggagagcagtatctggaggatgtgtgtaacgacgggggcgggcgaggagggtctgggc
ctgcagacgggcgatagcagccaccagacggaggacaaagagcccagtgtggagcgaggg
aggaacggaggaggggagggacacaggagcagttaccttcagagtacagacaagcttgca
ccttttaacggacagtgtctaaacggccatgccaggacagaggtggagaggcaggccaag
aacggccatgctgccaggacagagggggagggagggaggcaggccgcctgcaggaacagc
cacataacagcctacagtgaggaaagctcaacatgtgagcagcagccccactcccctgaa
ggtgtaaccctggcagaccccctgagcctggcagaccccatggcagtggccaactacaca
gagacagaacacactgggaacaacaaccacctcaggctggcaatcccagagatgaatgag
gacagaggctgggacacagagaggacaggacactgtcttcagggacagacggtctgcaag
aggacccgctccaactctaccagtgtccatccatactggatcggagacctggacactatt
atcctgaagacacctgagctttaccagagcaacacccacggaaccgctggtttctttggc
agcaggaagtccctgtcccagcagctggagtttcctcacaaccccaaccagcccgttccc
cgcccctctcgctctcttagctccgcccatctggtccactcctgcagtaacgtccaagcc
ttcatcatctgtaacattgtgctgatgaagggccatggcaagggtctggggttcagtatc
gtggggggcagggacagcatgtatggacccatgggtatctacgtcaagaccatcttccct
ggaggggccgcggctgcagatggcagactgcaggagggggatgagatcctggagttgaat
ggagagtctctacatggcctaactcatgaggacgcactgcagagattcaaacagataaag
aagggtctgttgactctggcggtgaggaccagcctgcgtgtcggcgccctctgtggccag
gcggcggtagcacagctgtgtcggtctcgctctctcagctccagtactggcatggcccgg
gtcagcactgatatgggggactacaactacctcagcggtgtcaccgccgccaacacacac
acaaacaccaacaccctgccgcctttggccaaaccccgggatcgcgtcatgatggagatc
actttgcacaaagaggctggtgtggggctgggtattgggctgtgttgtgtgccctctgga
gatggttgccgtggcatctatatccacaccctgtcccctgggtcggtggcacacatggac
agtagactcagatgtggagatgagattatggagatcaacaacactgtggtgtacaacatg
gtgctgaacgatgtgtacacggttctgagccagtgcgcacccgggccggtccagatcatc
atcagtcgacaccccgaccccaaagtgtcagagcagcagctgaacgatgccatagcccag
gctgtagagaccagcaaactaaagcaggacgccagtcagtggagtataaacggcctgcgt
aggtctgacccctgctcccactccagagggaagtgtgagcgctgtgtggcgaggagcttc
agccaactgactgcccggcgagcccagaagaacatgactcgctcctgtagtgacagcaac
acatacaaccagaacccccatcataaccatcagcacaactgctgccccggaccaggaacc
aacctggttaatggtcaaaccctgactgtacccaaccacaacacgcaccataatctgatg
ggaagggtccacagcctcgacatccccatggggtccacggctgagccctggtgtgataac
agactgtctgcactggtctgccctgtgcctgatgacgactacaatgtcccctacaactcc
ccagcagccaacctctccagccagcgtaccttagacctggccactaggggaaataagaac
aggcccaaagccctggcacctccaaggaggtacagcagacaccaggacgtcactagtgag
gagggggccactgggggcctgccggactccaatggttccagtagaggctcccctgttaga
gaggacggatggagccccacacataccaactgtcaggaagtagagagtgagagagtaaga
gagagagaaagagagagagaacactcagggggaagtggagagaatctcacccactctgac
gctcactctgctgccatcaccgactgccctcgatactcatcctgcacagaagacagacca
cacacaggtgctgagtctgccctccacctctgctcccagagtaagaggccgggcctgagg
aggcaggctcgcgtggagcagctcaccccagaaaagcttcacgacccctgggttaggatc
tccgacagcccccctgatcttggaggtcctggagacccccatcacaaccagagtccgaat
catccgagcccacaccaacacaacacacactcccacaatagcacacatcaacaacaaaca
caccatctcagctcacaccacgacgcaacacacactccatcccaaccagtcgccatgagc
caaaggagtgagtttcctgagcttcctgaactcaacagtacttccgaccaccacaccacc
ccagaccccaccaccccctccacccctgcctccctaatctccacccctagcccaatgact
gaggaccccccaggggtgaggaaggcccccccggttgcccccaagcctatgtggaaccgt
cagagcctcaggagtatcaggaacgggaggccccagccggagctggccaaacccctggac
aacagaggcggtggaaccaccttcggggtaagtctacggcccacctcctctgcagccaac
ctgtcaatcaagcagaagatccattcatttgagaccttctctagtcctgatggtaagggt
caggagaggtggggcaacaacaggaggcccctagccccctccacctccctccctctgaag
gacaaggcacccatcaggagtgacccccctctcttagaggagaatggtacaatccaacat
gacatgggcaaaggagctaaagtgacctctccaatctctgacgaggaaaaggacggaagg
gtgtcctcttctccccttgcagcctctcctcactccacccatcctccctctcctgcctcc
cacccttctcctccaacctgcttttctcttcttccgaccccccaccctgcctcggagctc
cagaccccagtggagctccagaccccagtggaagagacaacagacaccaatacagaaatc
tctgactcaccatcccccgaggacaccaccaccaccccatccaccctagaggcatctctc
ccgaggccgaccccagaaacagagcccctggatgaggctgtggaggcctccgtctccccc
ctctggcccggtgcccaggagaggaggggggagggagaccagagccatgcccaggctcag
ggcaagcaggccagcctgcggacgcgtagccttcccctgcctgcctctccctccccagat
gggtcaacaactctaagaggactggagggagagagcctggggaagatactttccttcagt
aaacaggtgtcccatgccctgatgcgttccatgcactccctactcccctccccttgtcca
actgtgccgggtaaccctgggtcagaccctccccctgcatcccctctagtcagcagcccg
gaggagcccgacccggcccagaacacccccctctcccctggccccgacagcaacgagaat
agcttctctgtcagcctatctgatctgaggcagtgtaccattgagcggggggaggaggga
agggacctggtctcacgcccatccctgtcagcatgtgcccactctgtcatatcagccatc
cctccacagcagatacagaccatgatccaggaagtgaaagctctggatgaggaaactctg
aagcaatttgagcacatccacgtggtgattctgcacaaggaggaaggagcaggtctgggt
ttcagcatcgctggtgggatagacctggagagcaaggccaccacagtgcatcgtgttttc
ccccatggcctggcggctcaagagggaaccgtggagaagggtgacgaggtgctgtccatc
aacggccagacactaaggggcgcgacacacgccgatgccaccgccacactgcgccaggcc
cgcaccatgagactggccgtggtggtggtgagcaaggggagagagggaggaggaggagga
ggagaagaaggagggaacaaggctggtgatccctctatcagcagtagcagtacagacctc
aaccctacagtggaggatgggggagccatgctgactgtggagctggagacaggaggaggg
gggcgggggatcagtttggaagggaggatctttaaaggtggcgctgcggagcagagtggg
ttgcagtctggcgatgaactgctgcaggtccagagctcctccctccaggagctgagccgc
ttcgaggcctggaacatcgtcaaagctctgcctgaggggcatatcactctagtcatccgg
aggaggaaggaggatgaggcagaaggctctgcctga
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integrated database retrieval system