Coregonus clupeaformis (lake whitefish): 121583621
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Entry
121583621 CDS
T08357
Name
(RefSeq) sorting nexin-30 isoform X1
KO
K17921
sorting nexin-7/30
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121583621
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121583621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Taxilin
Gpi1
Chromo
Motif
Other DBs
NCBI-GeneID:
121583621
NCBI-ProteinID:
XP_041755663
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MSAGTAKSLASSGQKPIQEICHPLGAEEAASAGVLTPSPDVGNTTSSIGEKEPSLPNGTP
VETSSPASSSSLLNRLQLDDDLDGETRDLFVTVDDPKKHVSTMETYITYRVVTKTTRVEF
DLPEYSVRRRYQDFDWLRTKLEDSQPTHLIPPLPEKFVMKGVVDRFSEEFVETRRKALDK
FLKRVADHPVLSFNQHLNAFLSTKDLNKRQGLALLSKMGESVKYVTGGYKLRGRPMEFSV
MGDYLDLFTLKLGTIDRIAQRIIKEQSEYLVELREYGPVYATWAAVEAELQEPLEGVSGC
IANCSSALDQLTEDMSEDFLPVLREYVLYIESMKTVLKKRDNVQAEYEAKLEAAALRKEE
RPTAKQVPADVEKCQDRVECFNADLKSDWDRWQNNKRQDFRQLLTGMADHNIHYYEKCLA
SWESVIPLLQDKQPQETQTEED
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcaccgctaaatcgctagcatcgtcggggcaaaaacccattcaggagatc
tgccatccgctcggagccgaggaggcagcgtcagccggagtcctcacacccagtccagat
gtcggaaacaccactagcagcatcggagagaaggaaccaagtctgcccaatgggacaccg
gtggagacatctagtcccgcctcctcgtcttccctcctgaaccggctgcagctggatgac
gacctggatggagaaacacgcgacctcttcgttaccgtcgacgaccctaagaaacacgtc
tccaccatggagacctacatcacctacagagtggtcactaagacaacgcgggtggagttt
gacctaccagagtactccgtgaggagacgctaccaggactttgattggctcaggaccaag
ttggaagatagtcagcctacacatctcataccacccctccctgagaagtttgtgatgaag
ggggtggtggaccggttctctgaggagtttgtagagacgaggaggaaggctctggataag
ttcctgaagagagtggctgaccatcctgtcctgtcgttcaaccaacacctcaacgccttc
ctctctaccaaggacctgaataagagacaaggcctagccctgctctctaagatgggggag
tcggtgaagtacgtgacaggagggtacaagctgaggggccgacccatggagttttctgtt
atgggagactacctggatttgttcacactgaagctgggtactatcgacaggatagcacag
agaatcatcaaagaacagtccgagtacctagtagagctgagggagtacggtccagtctac
gccacctgggcggcggtggaggcggagctacaggagcccctggagggtgtgtccggctgc
atagctaactgctccagcgctctggaccaactcaccgaggacatgagcgaagacttcctg
ccagtgctccgagaatacgtcctctatattgagtccatgaagactgtgctgaagaagagg
gacaacgtccaggcggaatatgaggccaaactggaagctgctgcgctccggaaagaagag
aggccaacagccaagcaggtgcctgcagacgtggagaagtgccaggacagagtggagtgt
ttcaatgctgacctgaagtcagactgggaccgctggcagaacaacaagagacaagacttc
agacagctactgactggcatggctgaccacaacatccactactatgagaagtgccttgct
tcgtgggagtctgtcattccactattgcaggacaagcagccacaggagacccaaacagag
gaagactga
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