Coregonus clupeaformis (lake whitefish): 121583961
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Entry
121583961 CDS
T08357
Name
(RefSeq) sphingomyelin phosphodiesterase 4-like
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121583961
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
121583961
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
121583961
NCBI-ProteinID:
XP_045081851
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Position
16:complement(37957457..37961437)
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AA seq
460 aa
AA seq
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MLVVRLLVKHMHALSGNTKLDQTDILPSATSETYLSEDLKRVVTSEYVQRLYLLLLHCFK
QWPMETSFRAVLETWLIYIQPWRYQKHVHSESKEKWASFIQENILMYTKLFSCFLKRFAH
VDLVNIDNATMVFRMAKVFAQPNLPELIENGERLLLHQGPLFPPTLMASQVQPTEIAALP
LPKTHINNKNLQMFGVEMRAEVLKLVQRLMQAQQTAKTMLDQPGNVSVGQFLCSWMRLIP
KTNSESGRNDMTKSDMKTVELLKKAVEHLNHVFNLNTGHLSQMMNMGSVEESKQLPDCIQ
SETGLILTDLGRMQIINGLRRFDIEYQGDPQLQPVRSYENAVFVQLMFWIATLINNRLEG
HMNDLCSQHNLLGRLGQHYLITSTVKGRFPKSTVTQQSQEDYHLRPRLSLRTFSSYRTLL
ILLLLYSLGSLFSISPLLSTCLILMVSFLYGLCMTVYVGK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtgagactgctggtgaagcacatgcatgccctctctggaaacacaaaacta
gaccagactgatatcttaccttctgccacctcagaaacctatctctcagaagatttaaaa
agagtggtcacatcagaatatgtacagaggttgtaccttctcttgctgcactgcttcaaa
cagtggcctatggagacgtccttcagagcagtattggagacgtggcttatttacatccag
ccctggagataccaaaaacatgtccacagtgaaagcaaagagaaatgggcctctttcatt
caggagaatattctcatgtacaccaaactattcagctgcttcttgaaaagatttgcacat
gttgacctcgtcaacatcgacaatgcaaccatggttttcaggatggcaaaagtatttgcc
caacccaatcttccagaattgattgaaaatggagaaagactgttattgcatcagggtccc
ctcttcccacccactctgatggcatctcaggtgcagcccactgaaatagctgctctgccc
ctgcccaagactcacatcaataacaagaacctacagatgtttggggtagaaatgcgagct
gaggtgctgaaactggtccagagactaatgcaggcccaacagactgcaaaaacaatgttg
gatcagccaggcaatgtatcagttggtcagtttctctgttcctggatgaggttgattcct
aaaaccaactcagaaagtgggaggaatgacatgaccaagtctgacatgaagaccgtggag
ctactaaagaaagctgtggaacacctcaatcatgttttcaacctcaacacaggtcatcta
tctcagatgatgaacatggggtcagtggaggaatccaaacagctccctgactgtattcag
agtgaaaccgggctgatcctgacagaccttggcagaatgcagattatcaatggccttcgc
agatttgatattgagtatcaaggggacccacagctgcagcctgtgagaagctatgaaaat
gcagtctttgtgcagcttatgttttggatcgccacactaatcaataacagacttgaagga
cacatgaacgatctatgctcacaacataacctgttgggaaggctgggacaacactacctt
atcacctccactgtaaaaggaaggttcccaaagagtacagtgacacagcaaagccaggag
gactaccacctgcggccacgccttagcctgcgcacattttccagttatcgcacattactc
attctcctcttactctactcgctgggatctctgttttctattagcccactgctcagcaca
tgcctcatcttaatggtgagctttttgtatggactgtgcatgactgtctacgtgggaaag
taa
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