Coregonus clupeaformis (lake whitefish): 121583980
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Entry
121583980 CDS
T08357
Name
(RefSeq) nodal homolog
KO
K04666
nodal
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121583980
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121583980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121583980
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121583980
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Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
PDF1_C
Motif
Other DBs
NCBI-GeneID:
121583980
NCBI-ProteinID:
XP_041755760
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All DBs
Position
16:32088159..32090450
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AA seq
417 aa
AA seq
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MVRLARLVFCALLVCFFRIGSSEKLSHHSRHYKSSPESSLGYLNSYHPNRYPLYMMQLYR
SFKTADSSQSAAVSAADDRPSPHDSDSVLSLIAKGCHQVGEKWTISFDMSSISVSDDVQL
SELRIRLPAFSASKRVTLDIYHSRKEDCESDTELCSEERFLLGSFGALPSDTRSQWNVFN
VTALLKYWLHQGDAVKQIQEARVGDVIEEEHGSGAPDDREEIDMAYIGHRRKKVHHPTDE
RVMMVVFSKHNLPRVGESAPTLIRTVEHSKYAILDQVSREAQGRRHKRNRMERVRMAGGI
AANATGSAAEAVQRPLCRKIDMWVDFDQIGWNEWIVYPKRYNAFRCEGECPTPVDESFSP
TNHAYMQSLLRLYHPDRVGCPSCVPAHLSPLSMLYYRDEDVVLRHHEDMIVEGCACH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggtacgcttggcacggctcgtcttttgcgcgctcctcgtctgctttttcaggattggc
agttcggagaaactgtcgcaccattcccggcattacaagagctcacccgagtccagttta
ggatatctgaattcgtaccatcccaacaggtaccctctctacatgatgcagctgtaccgc
tccttcaagactgcagactcctcacagtccgcggctgtcagcgcagcggatgacagaccc
tctccacacgattctgattcagtcctcagtctgatagcaaaaggttgccatcaagtgggt
gagaaatggaccatcagttttgacatgtcctccatctctgtgagtgacgacgtccagctg
tcagagctacggatcagactaccagcgttctccgcctccaagcgcgtcacattggacatt
tatcactcacgaaaggaggactgcgagtctgacactgaactgtgcagcgaggaacgcttt
ctcttgggcagctttggcgcattgcccagtgacaccaggtctcaatggaacgtgttcaat
gtgacagctctgctcaaatattggctgcaccagggagacgcagtgaagcaaatccaagaa
gcaagagttggagatgtgatagaggaagaacacgggagtggggcaccggacgacagagag
gaaattgacatggcctacatcgggcataggcgaaagaaagttcaccatccgacagacgaa
cgggttatgatggttgtcttctccaagcacaatctgccccgagttggcgagagcgcaccc
actctcatccgtaccgtggagcactccaaatacgcaattttggaccaagtcagccgtgaa
gctcaagggcgacgccacaagagaaaccgaatggagagagtgcggatggccggcggaatt
gcagctaatgctactgggtcagcggctgaagccgtccaacgcccactctgtcggaagatt
gacatgtgggtagatttcgaccagatcggctggaatgagtggattgtgtatccaaagcgc
tacaacgcgttccgctgcgagggcgagtgccctactccggtggatgaatccttcagtccc
accaaccacgcatacatgcaaagcctgttgagactgtaccatccggatcgcgtgggttgt
ccctcctgcgtgcccgcgcacctcagcccgctgtccatgctgtactaccgggacgaagac
gtggtgttgcggcatcacgaggacatgatcgtggaggggtgtgcctgtcactga
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