Coregonus clupeaformis (lake whitefish): 121584114
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Entry
121584114 CDS
T08357
Name
(RefSeq) LIM/homeobox protein Lhx6-like isoform X1
KO
K09375
LIM homeobox protein 6/8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121584114
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
121584114
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
DUF5437
Motif
Other DBs
NCBI-GeneID:
121584114
NCBI-ProteinID:
XP_041755879
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Position
16:42885726..42891335
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AA seq
354 aa
AA seq
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MYWNNEVPSPLPEENKVLLDNVFVKQSHSDGESYADVKEEAPLLPSPLVTPSMCLHPTLA
SPTPVPSTGKNQCASCGTEIQDRYLLKVNNLNWHVGCLECSVCRVSLRQHNSCYIKNKEI
FCKLDYFSRFGTKCGQCRRQVYASDWVRRARGSVYHLACFACYSCKRQLSTGEEFGLVEG
RVLCRAHYDTMVENLQRAAENGTGLTLEGAFPSDQDGQPKPAKRARTSFSAEQLQVMQSQ
FNQDNNPDAQTLQKLSDMTGLSRRVIQVWFQNCRARHKKHPPPQHNGHLQGAPHPHSRMP
PSLSDDLYSPFSSPDRPHLLALHGYIDSHPFSMLSAPNHLTHPGMALPQLPISR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtactggaacaatgaagttccatctccactcccggaggagaataaagtcttgttggac
aatgttttcgttaagcagtctcactcggacggggagtcttatgcggatgtaaaagaagag
gctcctctcctgcccagtcctctggtaacaccgtctatgtgcttgcatccgaccctggcc
tccccgacgccggttccgtccaccgggaaaaaccagtgtgccagctgcggcacagagatc
caagacagatacctactgaaagtgaacaatttgaattggcacgtgggatgtctggagtgt
tcagtatgcagagtatcattacgtcagcacaatagctgctacatcaaaaacaaagaaata
ttttgcaaattggattatttcagtaggtttggcaccaagtgtggccagtgcaggcgccag
gtgtatgccagtgactgggtgcggcgggcgcggggcagtgtgtaccacctggcctgcttc
gcctgctactcctgtaagaggcagctgtccacgggggaggagtttggtctggtggagggc
agggtgctatgtcgagcccactacgacaccatggtggagaacctccagagagcggctgaa
aacgggacgggtctcactttggagggagccttcccctctgatcaggatggccaacccaaa
ccagccaagagagcacgtacttccttcagcgctgagcaactacaggtgatgcagtctcag
tttaaccaagacaacaaccctgatgcccagactctacagaagctgtcagacatgacagga
ctgagcagacgggtcatacaagtttggtttcaaaactgcagagcaagacataaaaagcac
cctccaccccagcacaacggtcacctccagggcgccccccatccccactccagaatgccc
ccctcactgtcagacgacctctactcccccttcagcagtcctgacagaccacacctactg
gctctgcatggatacattgacagtcatcccttctcgatgctgtctgcccctaaccacctc
acccacccaggcatggccttaccacagttacccatcagccgctaa
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