Coregonus clupeaformis (lake whitefish): 121584292
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Entry
121584292 CDS
T08357
Name
(RefSeq) transient receptor potential cation channel subfamily M member 6
KO
K04981
transient receptor potential cation channel subfamily M member 6 [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121584292
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121584292
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121584292
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: Other
Alpha family [OT]
121584292
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121584292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
Alpha_kinase
TRPM_tetra
LSDAT_prok
Ion_trans
Orai-1
Motif
Other DBs
NCBI-GeneID:
121584292
NCBI-ProteinID:
XP_041756049
LinkDB
All DBs
Position
16:28751294..28796084
Genome browser
AA seq
1968 aa
AA seq
DB search
MNAAPTMSRRSWIEDTFCKRACGKFIPACRDLHRCFPMCQVCQNLIRCCCGRLVGEHTWL
ETGPSMSSWPGPGAGQEEEWSVECHTQASATDAYGTIDFQDSAGRNCHAKYVRVAVDSKP
EALLQLMRSEWQMERPKLLLTVHGGAENFPLPLKVRQAFSKGLITAAQSTGAWILTDGIN
TGVSRYVGEAVKTYGTHDLRKRNAVGVTPWGVIDNHSDLIGRDVLRPYQPLGNPLSKRVC
LNGLHSHFLLVDDGTLGKHGCQLGLRRKLERHIQLQKIHPRLNQGVPVVCVVVEGGPDIV
SMVLEYVSSVPPVPVFVFEGSGRAADLLAFLHKQTAMDRVLDTDIKEDFLLRIGGMFGLE
RADASQLYNLLMESMDYRQSITIFDSEDQQEADCAILTATLKGTKASPAEQLSTALAWDR
ADIAKKHILVYGQHWQVGSLEQAMLDALVMDRVGFVKLLIDNGMTMNRFLTVSRLEELYN
TQQGPTDNFLHHLVEDVKQTHISKGYRVSLIDMGQVIEYLIGGAYRSTYTRKHFRAYYNR
LHAHCKETGRDSSGPLNKKRRADCTLHPHQSTDSSPSRPPFFRTAQPYKRKERSMVLRDL
KVGQQQSSELGESPLFVYSFNDLFVWAVLQRRQQMALFLWQHGEEAMARATVACKLYGAM
AYEFRQSNMDDTTAEQLKTYSMDFGQLAVDVLDRAFRQNERMAMKLLTSEMEDWSHFTCL
QMAVSSRLRPFVSHSCTQMLLTDLWTGRLNMRKNSWFKIILSILMPPAILLLEFKSQAEM
SHVPQSQEALQFGWDTGRPEAAQEEGHTDGQDAEKGSAWWESCSDPEADTITPVTTQCFF
WTRRLYDFYTAPVVKFWFHTMSYLAFLMLFSYTVLVKMEDRPSTQEWLVIAYIISTAVEK
TREVFMSEPRNPSQKLKVWFGEYWNVSDFLAILLFLVGLVLRWDSGFYRTAGRITYCLDI
IFWYVRVLDLLAVNQHAGAYLTMITKMTSNMFYIVVMMAIVLLSFGVSRKAILSPDEALS
WSLLRDVVNQPYWMIFGEVYAGEIDACAGDTPCVPGAFLTPFLQAVYLFFQYIIMVNILI
AFFNNVYIDMKSISNKLWKYNRYRYIMTYQEKPWLPPPLIILSHMNLCVNAIYRKHRGSS
EQERDSCGLKLYLGQEDLKRLHEFEERCLVSYFHEKNQDVLCSQINMVRATAERAEEMVV
VMGEVSDRVHFIQDTLQVLDSQLGQLQDLSALAVDTLTLLSASDSLQQEEARLGRCRPIT
PSHHHVPHSWTLPHGGGGSVDIMPCHTPRAYRSTPPSLLWGHTSSRSQRPSLEWHTGAWG
GGNHGGRGAGETEDEEVHGVMVHHSGEVWPVGYRFAPHGFLPHLGGAGLRDRTPCESCVP
SRCGSPPYPSAWAIDSSLEPPHGKPRVCCDPEMSMEEEREEVGQPFDVNVSRTSSHAFLL
SDPQDERGCGSRGLVNPAFCKDDDPGAARSRRGQWGRKRPHRWVGLSRDRPYSHSRSLSS
SMENMALSGVPLSPLRASFPALDCLSEGGSFTADRPLGCSKSREWSEWFDLAVTSGSRER
CQGRKTVKILEESSSDTVKEVDSYLSDVCRKRRRRGGEPVCWSASASLNPLNSEPMDSLQ
KVSFSRQDSSQSVWTSWACSVSCRSSVRSGIAPEAKSSTFQSTEDLDPHYSAMERNNLMR
LAHTIPFTPVSIMAGEEVSVYSLEEVEAAGPEFSVSSWSSRGLSALLQPLSSEGCLDGGL
RRATRVLCTWAERDVLRVGCVYVVKATRPEVVRTWQRVFHSDTPLQLCLREIQQQRAAQN
LMHVFNQVKPENMPHSPRFLDVSLLHWHSDGQWLTIERNMTGDFRKYNNNTGEEIAPCCG
MEEALLAFSHWTYQYSCRELLVLDVQGVGSELTDPSVIRPDDKSSCGDMVFGPTNLGDAA
IQSFVIKHTCNSCCENLGLSDLRRSTDSHEKTEHRSFEKESGLIMTRM
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagctcctacaatgtcacggaggtcttggattgaagacaccttctgcaagaga
gcttgtggtaaattcatcccagcatgccgagacctacacagatgttttccaatgtgtcaa
gtatgccaaaacctaataagatgctgctgtggacgtctggtaggggagcacacctggctg
gagactggcccctccatgtccagctggcctgggcctggggcagggcaggaagaggagtgg
tcagtggagtgccacacacaagccagtgccaccgatgcctacggaaccattgacttccag
gacagtgctggacgtaactgccatgccaagtacgttcgtgttgcggtcgattccaagcct
gaggctctgctgcagctgatgcggagtgagtggcagatggaacgtcctaaactactgttg
acggttcatgggggggcagagaacttccccctccccctcaaggttagacaggccttcagc
aaaggcctgatcaccgcagcccagagcactggagcctggatactcacagacggcatcaac
acaggtgtgtcccggtacgtaggggaggctgtgaaaacatatggcacccatgacctcagg
aagaggaacgctgtaggggtcacgccctggggcgtaattgacaaccacagtgaccttata
gggagagatgtgctcaggccttaccagcctctgggaaaccccttgagtaagagggtgtgt
ctgaacggcctgcactcccacttcctgttagtggacgatggaactctgggaaaacatggc
tgccagctgggactgaggaggaagctggagagacacattcaactgcagaagatccaccct
aggcttaaccagggtgtgccagtggtgtgtgtggtggtggagggtggccctgacattgtg
tccatggtgctagagtacgtgagcagtgtgccccccgtgcctgtgtttgtcttcgaggga
tcaggtcgggcggctgacttgctggcattcttacacaaacagactgctatggacagggtg
ctggacacagacatcaaggaggacttcctgctgaggatagggggcatgtttggtctggag
agagcagacgccagccagctctacaaccttctgatggagagtatggactacagacagtct
atcacaatcttcgactctgaggatcaacaggaggcagactgcgccattttgacggccaca
ctgaaaggcaccaaggcgtctcctgcggagcagctcagtacagctttggcgtgggaccga
gcggatatagctaaaaaacacatcctggtgtatggccagcactggcaggtaggctcgttg
gagcaggccatgctggatgctctggtcatggaccgggtcggctttgtcaaactcctgatc
gacaacggtatgacaatgaaccgcttcctgaccgtgtcacgcctggaagaactctataac
acgcagcagggaccaacagacaatttcctccatcacctcgtggaagatgtgaaacagacc
catatatccaaaggatacagagtctccctcatagacatggggcaggtgattgagtacctg
ataggaggagcctatcggagcacatacacacggaaacacttccgggcctactataaccgc
ctacatgcccattgcaaggagactggacgggatagttcaggaccccttaacaaaaagagg
agggcagactgcaccctccacccgcaccaaagcactgacagcagtccatcacggccaccc
ttcttccgcactgctcagccctataaacgcaaggaaagatccatggtgctcagggacctg
aaggtgggccagcagcagagctccgagctgggcgagtctcctctgtttgtttacagcttc
aatgacctgtttgtgtgggccgtgctgcagaggcggcagcagatggcgctgtttctgtgg
cagcacggggaggaggccatggcccgggctacagttgcctgtaagctgtatggtgccatg
gcctacgagtttcggcagagcaacatggatgacaccacggcggagcagctcaaaacctac
tctatggactttggtcagctggcggtggatgtgctggaccgtgccttcagacagaacgag
cgcatggccatgaagctgctgacttcggagatggaggactggagccacttcacctgcctg
cagatggctgtgtcctcccggctccgcccctttgtctcccactcctgcacccagatgctg
ctcaccgacctgtggaccggccgcctcaacatgaggaagaactcctggttcaagatcatc
ctgagcatcctcatgccccctgccatcctgctattggagtttaagagccaggcagagatg
tcccatgtgccccagtcccaggaggctttgcagtttggttgggacacgggaagaccagag
gcagcccaggaggaggggcatacggatggccaggatgcggagaagggatcagcatggtgg
gagagttgctcagaccccgaagctgacacaatcacacccgttaccacccagtgtttcttc
tggaccaggaggctgtacgatttctacaccgctcctgtcgtcaagttctggttccacacg
atgtcctacctggcctttctcatgctgttctcctacactgttctggtaaagatggaggac
cggcccagcactcaggagtggctggtcattgcctatattatatccaccgctgtggagaaa
acaagagaggtgttcatgtcggagccgaggaatcccagtcaaaagctgaaggtgtggttt
ggagaatactggaatgtgtctgacttcctagctatcctcctcttcctggtggggctggtg
ctacgttgggacagcgggttctaccggactgccgggcggattacctactgtctggacatc
atcttctggtatgttcgggtgctggacctgctggcggtcaaccagcatgccggagcctac
ctcaccatgatcaccaagatgaccagtaacatgttctacattgtggtgatgatggcgatc
gtgctgctgagtttcggcgtgtccaggaaagccatcttgtctccagacgaagctctatca
tggagcctgctcagagatgtggtcaaccagccgtactggatgatttttggagaagtgtac
gcaggggaaatagacgcctgtgcaggtgacacgccgtgtgtccccggggccttcctcacc
ccgttcctccaggctgtctacctcttcttccagtacatcatcatggtcaacatccttatt
gccttcttcaacaatgtctacattgacatgaagtccatatccaataagctgtggaagtac
aaccgctaccgctacattatgacctatcaggagaagccgtggttgcccccgcccctcatt
atcctgagtcacatgaacctgtgtgtgaacgccatttaccggaaacacagaggctcgtcc
gagcaggagagggactcctgtgggcttaagctttatctgggccaagaggacctgaagagg
ctgcatgagtttgaggagaggtgtttggtgtcgtatttccatgagaaaaaccaagatgtt
ctctgcagccagatcaacatggtccgagccactgcagaaagggctgaggagatggttgtg
gttatgggagaggtgtcggacagggtccacttcatccaggacaccctgcaggtgctggac
agccagctgggtcagctgcaggacctgtccgccctggccgtggacaccctcaccctcctg
tcggcctccgacagcctgcagcaggaggaggcccgcctgggccgctgtcggccaatcacc
ccctcccatcaccatgtcccccacagctggaccctcccccacggaggtggaggcagtgtt
gacatcatgccctgccacacccccagggcctaccgcagcaccccaccctccctgctgtgg
ggccacacctcctcccgcagccaacgcccgtcactggagtggcacacgggggcctggggg
ggcggcaaccatggagggcggggggctggcgagacggaggatgaggaggtacatggtgtc
atggtgcatcacagtggcgaagtctggccagtgggttaccgcttcgccccccatggcttc
ctccctcacctgggcggtgcagggctcagggacaggaccccctgtgagtcgtgcgtgcct
tcccgctgtggctctcccccgtacccttcggcctgggctatagacagttctctggaaccc
ccacacggcaaacccagggtctgctgcgaccctgagatgtccatggaagaggaacgggag
gaggttgggcagccctttgatgtgaatgtgtccaggacctctagtcatgcctttctgttg
tcggacccacaggatgagagaggctgtggttccaggggtttggtgaaccccgccttctgt
aaggacgatgaccctggggcagctcgctccagacggggccagtggggcaggaagcgtcct
caccggtgggtgggtctgtccagggaccggccctacagtcacagccgctctctctcctct
agcatggagaacatggctctctctggtgtccccctgagcccgctacgagcctccttcccc
gccctcgattgcctgtcagaggggggaagcttcacagctgacagaccccttggctgcagt
aaaagcagagagtggtccgaatggtttgacctggcagtgacctcagggagcagagagagg
tgtcagggcaggaagacagtcaagatcctggaggagagttcttcagacactgtgaaagag
gtggactcatacctctctgacgtgtgcaggaagaggaggcgcaggggaggagagcctgtg
tgctggtctgcctctgccagcctaaacccgctcaattctgaacccatggattcgttgcag
aaagtatctttttcacgtcaggactccagtcagtccgtgtggaccagctgggcctgctct
gtcagctgcaggtcctcagtgcggagtgggatcgcacctgaagcaaagtcctctacattt
caatccacagaagacctggacccacactactcagccatggaaaggaacaacctgatgagg
cttgctcacaccatacctttcacacctgtctccataatggcgggagaggaggtgagtgtc
tactccctggaagaggtggaagctgcaggcccggagttctccgtatcctcctggtcatcg
cgggggctgtctgcgttgctgcagccactgtccagcgagggctgtctggatggtgggctg
cgcagggccacgcgtgtactttgcacctgggccgagagggacgtcctgagggtgggctgc
gtgtatgtggtcaaagccaccaggcccgaggtggtccgcacctggcagagggtcttccac
agcgacacccccctccagctctgtctgcgggagatacagcaacagagagctgctcagaat
ctcatgcatgtgttcaatcaagtaaaaccagaaaacatgcctcattctcccaggttcctg
gacgtgtctcttcttcactggcactcagacggccagtggttgaccatagagaggaacatg
accggagacttcaggaagtacaataataacacaggagaagagatcgccccctgctgtggg
atggaggaagcgctcctggccttctcccactggacctaccaatactcctgcagggaactg
ctggtgctggacgtacagggagtgggatcggagcttacagacccatcggtcatccgacca
gacgacaaaagctcatgcggtgacatggtgtttggtcctactaacctgggagacgctgcc
atccagagctttgtcatcaagcacacctgcaactcctgctgcgagaacctcggactctca
gatttgaggaggagcacggacagccacgagaaaacagaacacagatcttttgaaaaggag
agtggattgatcatgactaggatgtaa
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