Coregonus clupeaformis (lake whitefish): 121584365
Help
Entry
121584365 CDS
T08357
Symbol
lifra
Name
(RefSeq) LOW QUALITY PROTEIN: LIF receptor subunit alpha a
KO
K05058
leukemia inhibitory factor receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121584365 (lifra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121584365 (lifra)
04090 CD molecules [BR:
cclu04090
]
121584365 (lifra)
Cytokine receptors [BR:
cclu04050
]
Interleukin receptor families
IL6/12 receptor family
121584365 (lifra)
CD molecules [BR:
cclu04090
]
Proteins
121584365 (lifra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
LIF-R_Ig-like
LIFR_D2
Pur_ac_phosph_N
Ig_J
GBBH-like_N
Lep_receptor_Ig
LIFR_N
Motif
Other DBs
NCBI-GeneID:
121584365
NCBI-ProteinID:
XP_041756128
LinkDB
All DBs
Position
16:complement(8300075..8323371)
Genome browser
AA seq
950 aa
AA seq
DB search
MLSWFFCILLLGLRVTESQASGLAPPQQVRLDADKAAQKLSVTWEDGHASTFDVEILRTE
LMEIVLNETVGVTADQSTGKHQWNWTSPVPLECTSLSVKVRSRDGQDVSEWSSQQILPGL
DLPDNAVAQMYPEGETVPVGSNMTFCCIVGEGQQFGKLRYXNVLMNETMLSRRTYATTMT
IREPSNTSGTNVVCSNEKNIIVTGAVVFVGYPPLPSDLVCETHDLISVDCQWTKGRDTYL
LGKTRQTYYTLNGRNCTKAKNSNMHCGWEQWEGNWTLVARNPLGQFRLTDAAQLGHRVRP
VAPVNLTTPEVYSWNASVGWHWNYNGYERLSLICQVQRTSHWNSSTQTYTGHGLNTAVLK
DLQPDEEYSVKVRCGSQKNFWKWGEWSLPLSFQTKMDRPKAPDIWVWMDSDNLGRVLWKP
LTKRESHGQVSGYEVTLWSPEENGQQTFTLPQSMYSHPINMTDRGSKVTVTARNPAGVSL
PANIVIPRHLPDTEDTTISKVAFNGSGFPLSWVAQTNASCGYVVDWYNTSCTQDCSVEWT
KVAADNTNTVVQSSNFFAGVRYTFSLYACSSESTVLLERWHGYMQELVPSQAVPRLSPNQ
EGSDVQLTWDQIPLEHQRGFILGYTVYLTNASHLTLLANITDPQLTNHTVRHLVLGSYKF
TVKAYTAAGEDGGATVSISLDPYTYWLILELLVALGAMTCVLILITIACYRKRKWVKKAF
YPEIPEPKLPGDWGITQGTLDVKPSPHSMVHIVEDPVWDSSKEALVSVPEEDEEGTGDEA
ADTDEPAVLRYYNQVVEEGSSSRGRPHASDSSASSTGSMDSGHTDVTYTGIQTSACSLAH
FQPQPDASQCAGDGGYRPQMQSASCPEDPQAGPEEHLQPPVGSFGGYQPQCSWKQDSPEA
DGGLDQAYLGSPTSVTSSQFLLPHDTSSEEGKEHPSSASTWFHNLLTGKP
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgctaagttggttcttctgcattctgctcctgggcctgagagtcacagagagccaggcc
agtggactcgcgcctccacagcaagtgaggctggacgcagacaaggcagcacaaaagctg
tcggtcacatgggaggacggccacgcctctacctttgacgtggagattctacgcactgaa
ctcatggagattgtgttgaatgagacagtgggtgtaacagcagaccagagcacagggaag
caccaatggaactggacctctccagtacccctggagtgtacctctctgtcggtcaaagtg
cgctccagagacggccaagatgtcagcgaatggagttctcaacagatccttccagggttg
gacctcccggacaacgcggttgcacaaatgtacccagagggggaaacggttcccgtgggc
agcaacatgacgttctgctgcatcgtgggagagggtcagcagtttgggaagctgcggtac
naaaacgtactgatgaacgagaccatgctgagtaggcggacctacgctaccacgatgacc
attcgggaaccgtccaacacctccgggaccaatgtggtctgcagcaacgagaagaacata
atcgtcaccggcgccgtcgtgttcgtggggtacccccctctgcccagtgacttggtgtgt
gagacccatgacctgatctctgtggactgtcagtggacaaagggccgagatacctacctg
cttggaaagacccgtcagacgtactacaccctgaacggaaggaactgcaccaaagccaag
aacagcaacatgcattgtggttgggagcagtgggaagggaactggaccctagtcgcacgc
aacccgctgggccagttcaggcttacagacgcagcccagctgggtcacagagtccgtcca
gtggcccctgtgaatttgaccaccccagaggtctatagctggaatgccagtgtgggttgg
cactggaactacaatggttacgagaggctgtcccttatctgccaggtgcaacgtaccagc
cactggaacagcagcacacaaacctacactggtcacggactgaacacagcggtactgaag
gacctgcagcccgatgaagagtacagcgttaaggtccgctgtggatcccagaagaacttc
tggaaatggggagagtggagtttgccgctgagtttccaaaccaaaatggaccgccccaag
gctcctgacatatgggtgtggatggacagcgacaacctaggccgtgttttgtggaaacct
ctaacaaagagagagagccacggccaggtcagcggttatgaggtgaccctgtggagcccc
gaggagaatggccaacagactttcaccctcccccagagcatgtacagtcaccccatcaac
atgactgaccgcgggagtaaagtcacggtcactgcgcggaaccctgcaggagtttccctc
ccagcgaacatcgtcatccccagacacttgccagatacagaggacaccaccatctccaag
gtcgcgttcaatggcagtgggtttcccctgtcctgggtggcccaaactaacgctagctgt
ggctacgtggtggactggtacaacactagctgcacacaggactgcagtgtggagtggacc
aaggtggcagcggacaacaccaacaccgtggttcaatccagtaacttttttgcaggagtg
agatacacgttttctttgtacgcctgttcatcagagtccacggttctgctagagaggtgg
catgggtacatgcaggaactggtcccgtctcaggccgtccccaggctgtcacccaaccag
gagggctctgacgtccagctgacctgggatcagattccactggagcatcagagaggcttc
atcctgggatacaccgtctacctgacaaacgcatcccacctcaccctactggccaacatc
acagatccacagctcaccaaccacacagtcaggcacctggtcctgggctcctacaagttc
actgtcaaggcctacactgcagcaggggaggacggaggcgccacagtgtccatctcactg
gatccctacacctattggctgatcctggagctcctggttgctctgggcgccatgacctgt
gtcctgatcctcatcaccatcgcttgctacaggaagaggaaatgggtgaagaaggccttc
taccccgaaattccagagcccaagctaccaggagactgggggataacacaggggactttg
gacgtgaagccctcgccccacagcatggtgcacatcgtggaggaccccgtgtgggactca
agcaaggaggctctggtgagcgttcccgaggaggacgaggagggtacaggtgacgaggcg
gccgacaccgacgagcccgccgtgcttcgctactacaaccaggtggtggaggagggctcc
tcctcccggggtcgtcctcacgcctccgactcctcggcctcctccaccggctccatggac
tcaggacacaccgacgtcacctacaccggcatccagacctctgcctgctccctggcccac
ttccagcctcagcctgatgcatcccaatgtgctggcgatggaggttaccggccccagatg
cagtctgcatcatgccccgaggatccccaagctggccctgaggagcaccttcagccccct
gtgggctcttttggagggtaccagccccagtgctcttggaaacaggactcccccgaggct
gacggcggcttggaccaagcctacctgggcagtcccacctccgtcacctcctcccagttc
ctgctccctcatgacacctcctcagaggagggcaaggagcacccgtcatcagcaagcacc
tggttccacaacctcctgacgggcaaaccctga
DBGET
integrated database retrieval system
