Coregonus clupeaformis (lake whitefish): 121584395
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Entry
121584395 CDS
T08357
Name
(RefSeq) glutamate receptor ionotropic, delta-2
KO
K05207
glutamate receptor delta-2 subunit
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121584395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121584395
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121584395
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
121584395
NCBI-ProteinID:
XP_045081891
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Position
16:18699961..19338491
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AA seq
737 aa
AA seq
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MKVVSAVLFLAIFWSQEWEPVLSDSIIHIGAIFDDSARKDDEVFRMAVADLNLNNEILET
EKITISVEFVDGNNPFQAVQEACELMNRGILALVSSVGCMSAGSLQSLADAMHIPHLFIQ
RAPAGTPRSSCPLTSRGRQDDYTLFVRPPVYLNDVILQVVSEYSWQKFIIFYDQQYDIRG
IQDFLDKTSQQGMDVSLQKVESNINMMITSMFRTMRVEELHRYRDTLRRAVLFMSPATAK
AFITEVVETNLVAFDCHWIIINEEISDQDVQELVMKSIGRLTLIRQTFPLPQNTSQRCVK
HNHRINTSLCDPKDPKAQTLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLTCIRKNS
KPWQGGRPMLDNVKKSGVSGLTGFLEFSDNGTNPNIYFEILGTNYGEDRGRGVSKLATWD
PVHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGYSIDVLDSLSN
YLGFKYEIYVAPDHKYGSQQANGVWNGLMGELVAKRADVGLSALTITPERESVVDFTTRY
MDYSVGVLLRKAERTVDMFACLAPFDLSLWACIAGTVLLVGILVYLLNWLNPPRLPMGAV
SSTTFYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTISR
IENSIQSLQDLSKQTELPYGTVLDSAVYEQVRSKAMNPFERDPMYSQMWRMINRTGGADN
NVEESKEGIRKHHALTN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtttcagcagtgttgttccttgcgatattttggagtcaggagtgggagccc
gtgctttctgattcaatcatacacatcggggccatctttgatgattctgccaggaaggat
gacgaggtgttccgcatggctgtggcggacctcaacctcaacaacgagatcctggagacg
gagaagatcaccatctctgtggagtttgtggacgggaacaaccctttccaggcggtccag
gaagcctgtgagttgatgaacagggggatcctggctctggtaagctctgttggctgtatg
tcggcaggctccctgcagtcgctggcggacgccatgcacatcccgcacctgttcatccag
cgtgcccccgccggcacccctcgctccagctgccccctcaccagccgcggccgccaggac
gactacaccctcttcgttcgcccgcccgtctacctcaacgacgtcatcctccaagtggtc
agcgagtacagctggcagaagttcatcatcttctacgaccagcaatatgatatccgtggg
atacaggacttcctggacaagacgtctcagcagggcatggacgtgtcgctgcagaaggtg
gagtccaacatcaacatgatgatcaccagcatgttcagaacaatgagggtggaggaactc
caccgctaccgggacacactgcgccgggccgtgctcttcatgagtcccgccaccgccaag
gcctttatcactgaggttgtggagacgaatctcgtggcgttcgactgtcactggatcatc
atcaatgaggaaatctcagaccaggacgtccaagagctggtgatgaagtcgattgggcgt
ctgactctgatcagacagaccttccccctgccccagaacaccagccagcgctgtgtcaag
cacaaccaccgcatcaacacctccctctgcgaccccaaggaccccaaggctcagacactg
gagataaccaaccgctacatctacgacacagtgctgctattggccaacactttccacagg
aagctggaggacaggaagtggcacagcatggccagcctcacctgtatccgcaagaactcc
aagccctggcaaggtggacggcccatgctggacaacgtcaaaaagtctggagtgagtggt
ctgactggcttcctggagttttcagacaacggaaccaaccccaacatctactttgagatc
ctggggaccaactatggcgaggacaggggcaggggtgtcagtaagctggccacctgggac
ccagtgcacggcctcaacggaacgctaacagacaggaagctggagaacaacatgaggggc
gtggttctgcgagtggtcactgtcctggaggagccctttgtgatggtgtcagagaatgtc
cttgggaagcctaagaagtaccaaggctactccatcgacgtgctggattctctctctaac
tacctgggcttcaagtacgagatctacgtggcccctgaccataagtacgggagccaacag
gccaacggggtctggaacggactgatgggagagctggtcgccaagcgggcggatgtgggt
ctctcggctctcaccatcacgccagagcgggagagtgtggtggactttaccacacgctac
atggactactcggtgggcgtgctgctcaggaaggccgagcgtaccgtggacatgttcgcc
tgcctggcgccctttgacctgtcactgtgggcgtgcattgcgggcaccgtgctgctggtg
ggcatcctggtctacctactcaactggctgaacccgccgcgcctgcccatgggcgctgtc
tcctccaccaccttctacaattccatgtggttcgtctacggatccttcgtccagcagggt
ggtgaagttccatataccaccctggccacgaggatgatgatgggggtatggtggctcttt
gctctgatcgttatctcctcctacacggccaacctggctgccttcctcaccatcagccgc
atcgagaactctatccagtccctccaagacctgtccaagcagacagagttgccgtacggg
acagtgttggactcggcagtgtacgagcaggtgcgcagcaaggccatgaacccctttgag
agggaccccatgtactcccagatgtggcgcatgatcaaccgcaccggaggggccgacaac
aacgtggaggagtccaaggagggcatccgcaagcaccatgctcttaccaactga
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