Coregonus clupeaformis (lake whitefish): 121584400
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Entry
121584400 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36-like isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584400
04121 Ubiquitin system [BR:
cclu04121
]
121584400
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121584400
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121584400
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121584400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
SPRY
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
TRIM_CC
U-box
Motif
Other DBs
NCBI-GeneID:
121584400
NCBI-ProteinID:
XP_045081567
LinkDB
All DBs
Position
16:18511949..18538064
Genome browser
AA seq
756 aa
AA seq
DB search
MSDTEDNQDMLPSLVQQIVQRITAGEVPIKNIERELICPICKELFTHPLILPCQHSVCHK
CVRELLLLNHEDSFDAGSECSLPGSPGPRSRVPSPSMERLDRLARSATLQRRSFGRRGSI
SSPGWRRGSVTPRVTTFPCPGCQHDVDLGERGMSMLFRNFTLESIVERYRQAARAAVAIM
CNMCKPPQQEATKSCMDCKASYCNECFKFHHPWGTPKAQHEYVGPTMNFRPKVLMCPEHE
MEKVNMYCEVCRRPVCHLCKLGGSHANHKVTSMSSAYKILKEKLSKSIHYLISKEDQVRT
QISHMEVLINETEENGQVAECRANEHFERLFQTLQERKSEMLNSIAQSRTRRLEQLRGQV
EEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQLHTRIAKSTESLRTFHPAANPSFDEF
VLDTSREETLLKELCFGGVPEPPIIDLSRSRVYNEGRLCWQLAEDTLATDHHVLEYRRLG
TEQDEEEGASRWCLTDRVYGPSTVVCDLEADSLYSFRVRSCRNSLYSPYSPEVTFHTPPA
PAFGFLFNDKCGFSSERLALSKRRDSVESVAGMAFLLAAERVQTGSYMGLDYIIGDMGIS
QGRHYWAFSVEPHSYLVKVGVASDSKLLEWFHNPRDTSSPRYDHDSGHDSGSEDTCYDLS
QPFTLLTVGMGKVFLPKASISSAGDHSNRVLPMPQRIGVCLDYEAGRVFFYDADTMRCLY
ERQVDCSGTMYPAFGLMGSGKVHLEEFITSKRLSYM
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataccgaagataatcaggatatgttaccgagtttggtccagcagatagtccaa
cggataacagcgggagaggtccctatcaagaatattgagcgggagctcatttgtccgatt
tgcaaggagctgtttacgcaccccctcatcttgccctgtcagcacagtgtttgtcacaag
tgtgtccgagagctgttgctgttgaaccatgaggattccttcgacgctgggtctgaatgt
tccctccctgggagcccgggaccccgatccagagtaccctcaccaagcatggagaggctg
gataggcttgcaagatcagccacactgcagagaaggtcgtttgggaggagaggatccatc
tcctcaccaggatggaggcgtggctctgtgaccccccgcgtcaccactttcccgtgccca
ggctgccaacacgacgtggacctgggtgagcggggcatgagcatgctcttccggaacttc
accctggagagcatcgtggagcgctaccggcaggcggcccgcgccgccgtggcgatcatg
tgcaacatgtgcaaaccgccccagcaggaggctaccaagagctgcatggactgcaaggcc
agctactgcaacgagtgcttcaagttccaccacccatggggcacccccaaagcccagcac
gagtatgtggggcccaccatgaactttaggcccaaggtgctgatgtgtccggagcacgag
atggagaaggtgaacatgtactgcgaggtttgccgccgtccagtctgtcatctgtgcaag
ctgggaggctcccacgccaaccacaaagtcacatcaatgagcagcgcctacaagatcctc
aaggagaagctatcaaagagtatccattacttaatcagcaaagaggaccaagtgaggact
cagatttcccacatggaggtgttgatcaatgaaactgaggagaatggccaggtggcggag
tgtcgggccaacgagcactttgagcggctgttccagaccctccaggagaggaagtctgag
atgctgaactccattgcgcagtcgaggacgcggcgtctggagcagctccggggccaggtg
gaagagtaccagggcatgctggagaatagcggcctggtgggctacgcccaggaggtcctc
aaggagacagaccagtcctgcttcgttcagacggccaagcagctgcacaccaggatcgcg
aaatccacagagtctctaaggacgttccaccccgcggccaacccctcctttgatgagttt
gtgctagacacttccagagaggagactctgctgaaggagctgtgttttgggggagtccct
gagcctcccatcatcgatctgtcccgtagtcgcgtctacaacgagggccggttgtgctgg
cagctggccgaggacaccttggccacagaccaccatgtccttgagtacaggaggctgggc
accgagcaggatgaggaggagggcgccagccgctggtgcctcacagaccgggtgtatggc
cccagcacagtggtgtgtgacctggaggccgacagcctctactctttcagagtccgcagc
tgccgcaactccctctacagcccctacagcccagaggtcaccttccacacaccacctgcc
ccagcgtttggcttcctattcaacgacaagtgcggcttcagctcggagcggctggcgttg
agcaagcgccgtgactctgtggagagcgtggccggcatggccttcctgctggctgctgag
cgtgtgcagacgggcagctacatgggcctggattacatcatcggtgacatgggcatctct
cagggcagacactactgggccttcagcgtggagccccactcctacctggtcaaggtgggc
gtggcctctgattccaagctgctggagtggttccacaacccccgagacactagtagcccc
aggtatgaccacgacagtgggcacgacagtggcagcgaggacacttgctatgatctgtcc
cagcccttcactctgctcactgtgggcatgggcaaagtgttcctccccaaagcgtccatc
tcttccgccggcgaccacagcaaccgggtgctgcccatgccccagcgcatcggcgtgtgc
ctggactacgaggcgggccgggtcttcttctacgatgcagacaccatgaggtgcctttac
gagcggcaggtggactgctctggtaccatgtaccctgcctttggcctcatgggtagtggc
aaggtccatctagaggagttcatcacgtcaaagcgactgtcgtatatgtga
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