Coregonus clupeaformis (lake whitefish): 121584417
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Entry
121584417 CDS
T08357
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121584417
04330 Notch signaling pathway
121584417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121584417
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
121584417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TLE_N
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
CFAP251_N
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
DSE1_N
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_NOL10_N
ASA1
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WD40_RFWD3
HALZ
Motif
Other DBs
NCBI-GeneID:
121584417
NCBI-ProteinID:
XP_041756214
LinkDB
All DBs
Position
16:complement(10697383..10721076)
Genome browser
AA seq
782 aa
AA seq
DB search
MFPQGRHPTPHQAPGQPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVVQAVERAKQVTMAELN
AIIGVRGLPGLPPTQQHLSHAHGSHVPLTPHPAGLHQAHLGGASLLALSSALGAPPPHLA
SKEDKKHPVEVEHLREREPGTSNTLLVADSLRNSDKRRNGPEFSNDTKKRKVEDKDSSHY
DSDGEKSDDNLVVDVSNEDPASPHGTRLPSPRENGLDKTRLLKKDPSCSPASTASSASSS
SLKSKEMGMRDKPGTPGLKSSTPTPRGDATPGPSATPTLRPSLSKPPSMDLPHPPILLTH
LTTAPVYPLAAGLRTPLAVPGSYPGPFGMLPHAAMNGELAGAAYAGLHNMSPQMSAAAAV
AAAAYGRSPMVGFDPHPHMRVPGMPPSLSAIPGGKPAYSFHVSADGQMQPVPFPPDALVG
PGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLN
RDNYIRSCRLLPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDSKV
CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG
RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVTKPDKYQLHLHESCVLSLQFAS
CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV
IY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttcccccagggtcgacacccgacgccccaccaggccccgggccaacctttcaaattc
accattccagagtcactggaccgcatcaaagaggagttccagttcctccaagcccagtac
cacagtttgaaactggagtgtgagaagctggccagtgagaagacagagatgcagaggcac
tatgttatgtactatgaaatgtcttacgggctgaacattgaaatgcacaaacagacagag
attgccaagaggctcaacaccatctgtgcacaagtcatccccttcctctcacaggagcac
cagcagcaggtggtccaggcggtagagagagccaagcaggtcaccatggctgaactcaac
gccatcattggggtacggggacttcccggtctaccacccactcagcagcacctgtcccac
gcgcacggctcccatgtccccctcaccccccaccccgcggggctccaccaggcccatttg
ggaggggccagtctgctcgccctgtccagtgccctgggggcgccgccgccccacctggcc
agcaaagaggacaagaaacacccagtggaggtcgagcacctgagagagcgagagccaggc
acaagtaataccctgctggttgctgacagtttgcggaactcagacaagcggcgcaacgga
ccagaattctccaacgacaccaagaagaggaaagtggaggacaaggactccagtcattat
gatagtgatggggagaagagtgatgacaacctggtggtggatgtctccaatgaggaccct
gcctccccgcatggaacgcgcctgccatcccccagggagaatgggctggacaagacacgc
ctcctgaagaaggacccctcctgtagccccgcctccacagcctcatctgcaagctcttcc
tccctcaagtccaaagagatgggaatgcgtgataagccgggtacgcctgggctgaagtcg
agcacgcctactcccagaggagacgccaccccaggacccagcgccacgcccactctccga
ccaagcctatccaagcccccctccatggacctacctcacccacctattcttttaacccat
ctgacaacagctcctgtgtaccccttagctgctggtctgcggaccccgctggcggtgcca
gggtcgtaccctgggcctttcggaatgcttccccacgccgccatgaacggggagctggca
ggcgccgcatacgccggcctccacaacatgtccccccagatgagtgctgcggctgccgtc
gctgcggccgcgtacggacgctcccctatggtgggctttgaccctcatcctcacatgaga
gtccctggaatgccccccagcttatcagccatccctggaggcaaaccggcctactctttc
cacgttagcgccgatggacagatgcagccggtgcccttccctccggacgccctggtgggc
ccgggcatcccacgccatgctcgccagatcaacactctgaaccacggcgaggtggtgtgt
gccgtcaccatcagtaatcccacgcgccacgtctacacgggtggcaagggctgcgtcaag
gtctgggacatcagtcaccctggcaacaagagtcccgtgtcccaactggactgcctgaac
cgagacaactacatccgctcgtgccggctgctccccgacggccggacgctcattgtgggg
ggcgaggccagcacgctgtcaatctgggacctggcgacgcccaccccgcgcatcaaggcg
gagctgacctcctctgcccctgcctgctacgccctggccatctcccccgactccaaggtc
tgcttctcctgctgcagtgacgggaacatcgccgtctgggacctgcacaaccagaccctg
gttaggcagttccagggccacaccgacggagccagctgtattgacatctccaacgatggg
accaagctgtggacgggggggctggacaacactgttcgatcctgggacctgagggaggga
cgccagctgcagcagcacgacttcacctcacagatcttctctctggggtactgtccgacg
ggagagtggctggcagtggggatggagagcagtaacgtagaggtgctccatgtcaccaag
ccagacaagtaccagctgcacctccacgagagctgtgtgctctccctccagtttgcctcc
tgtggtaaatggtttgtgagcacagggaaggataacctgctgaatgcgtggaggacaccg
tacggagccagtatattccagtcgaaggagtcttcgtcggtgcttagctgtgacatctca
gtcgatgataagtatatagttacaggttctggagataagaaggccactgtctatgaagta
atctactag
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integrated database retrieval system
