KEGG   Coregonus clupeaformis (lake whitefish): 121584421
Entry
121584421         CDS       T08357                                 
Name
(RefSeq) ubiquilin-1 isoform X1
  KO
K04523  ubiquilin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121584421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121584421
   03051 Proteasome [BR:cclu03051]
    121584421
Membrane trafficking [BR:cclu04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    121584421
Proteasome [BR:cclu03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    121584421
SSDB
Motif
Pfam: UBQLN1 ubiquitin UBA STI1-HOP_DP Ubiquitin_5 Rad60-SLD YukD UBA_7 Dsc3_N DNA_pol_phi UN_NPL4 Rad60-SLD_2 CUE Het-C
Other DBs
NCBI-GeneID: 121584421
NCBI-ProteinID: XP_041756226
LinkDB
Position
16:complement(10928370..10937411)
AA seq 569 aa
MDNTVDVDEQPSAAECNIIRVTVKTPKEKEEIAIPENSSIKQFKEQIAERFQAQTEQLVL
IFAGKILKDADLLSHQGIHNGLTVHLVIKTQSRPPELSASPSSSTASEQAQPEGPTSVPG
PPPVGPTSVPGPSPASSATSTLSLGGLGTAAEGSGLSELQRQLMSNPELLAQIMDSPLVQ
GMLSNPDTMRQLIMANPQMQQLLQRNPNISHLLNNPDVMRQTLEIARNPTMMQEMLRNQD
RALSNLESIPGGNNVLRRMYTDVQGPMLNAADQEQIAGNPFASLMTSSSGETQSPRVENR
DPLPNPWVPPASTDTLVGTATPTTSPTQSSNGPQTTLHNLGGRTSNSAGMFNSPGMQSLL
QQITENATLMHNMLSAPYIRSLLNSLSQNPDLAAQMMLNNPLFSGNPQLQQQMRQQLPVF
LQQMQNPEMLSAMFNPRAMQALLQIQQGLQTLATEAPGFIPGVGLGGAVSGLNPAPGLSS
DPAPSDLSSESQVVTETGQRQQQQFVHQMLDALASTNQQAQTEELPFQQQLEQLSTMGFL
NPEANLQALIATGGDVNAAVERLLGSQPS
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggataatactgtggatgtggacgagcaaccatccgctgctgaatgtaacatcatcaga
gttactgtgaaaacaccaaaggaaaaagaggaaatcgccattccagagaacagctctatc
aaacagtttaaggagcagatagccgagcggttccaggcacaaacagagcagctggtgctc
atctttgctgggaagatcctcaaagatgcagatctgctgagtcaccaaggcatccacaac
ggactgaccgtccacctggtcatcaagacccagagcaggcctccggagttgtctgcctct
ccttccagcagcactgcctcagaacaggcccaaccggaaggccctacctctgtccctgga
ccccctcctgtaggccctacctctgtccctggaccctctcctgcttcttcagccacttct
accctcagcctgggaggtctggggacagctgctgaggggtctggtctctctgagctgcag
aggcagctaatgtccaaccctgagctgctggcccagattatggacagccccttggtccag
ggcatgctgtccaacccagacacgatgagacagctcatcatggccaacccccagatgcag
cagctgctgcagcgcaaccccaacatctcccacctgctcaacaaccctgacgttatgaga
cagaccctggagatagcacggaacccgaccatgatgcaggaaatgttgcgcaaccaggac
agggcacttagcaaccttgagagcatccctggtggcaacaatgtcctccgcaggatgtac
actgatgttcagggacccatgctcaatgctgctgatcaggaacagattgcaggaaaccct
tttgcttctctgatgacctcgtcgtcaggggaaacccagtcaccccgggtagagaacaga
gaccccctccccaacccctgggttcctcctgcttccacagacacccttgtaggcaccgcc
acacccaccacttcccccacccaatccagcaatggccctcagaccaccctgcacaacctg
ggaggtagaacatctaacagtgcgggtatgttcaatagtccgggcatgcagagtcttctg
cagcagatcactgagaacgccacgctgatgcacaacatgctgtcagccccctacataagg
agcctactcaacagcctgagccagaaccctgaccttgcagcacagatgatgctgaacaac
ccactgttttctgggaacccccaactgcagcagcaaatgagacaacaactcccagtgttc
ctccaacagatgcagaaccctgagatgctgtcagccatgttcaaccccagggccatgcag
gcgctgctgcagatccaacagggactgcagacccttgccactgaggcacctggattcata
cctggggttggactgggaggcgctgtctcaggtcttaaccctgcccctgggttgtcatca
gaccccgcccctagtgacctcagcagtgagtcccaggtagtcacggaaacgggtcagcgg
caacaacaacaatttgtgcatcagatgctagacgctctcgctagcaccaatcagcaggct
cagactgaagagctgccgttccagcagcagttggagcagctgagtaccatgggcttcctc
aacccagaggccaacctgcaggccctcatcgctaccgggggagacgtcaacgctgccgta
gaacgactgctgggctcgcaaccctcgtaa

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