Coregonus clupeaformis (lake whitefish): 121584421
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Entry
121584421 CDS
T08357
Name
(RefSeq) ubiquilin-1 isoform X1
KO
K04523
ubiquilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121584421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584421
03051 Proteasome [BR:
cclu03051
]
121584421
Membrane trafficking [BR:
cclu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121584421
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121584421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
STI1-HOP_DP
Ubiquitin_5
Rad60-SLD
YukD
UBA_7
Dsc3_N
DNA_pol_phi
UN_NPL4
Rad60-SLD_2
CUE
Het-C
Motif
Other DBs
NCBI-GeneID:
121584421
NCBI-ProteinID:
XP_041756226
LinkDB
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Position
16:complement(10928370..10937411)
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AA seq
569 aa
AA seq
DB search
MDNTVDVDEQPSAAECNIIRVTVKTPKEKEEIAIPENSSIKQFKEQIAERFQAQTEQLVL
IFAGKILKDADLLSHQGIHNGLTVHLVIKTQSRPPELSASPSSSTASEQAQPEGPTSVPG
PPPVGPTSVPGPSPASSATSTLSLGGLGTAAEGSGLSELQRQLMSNPELLAQIMDSPLVQ
GMLSNPDTMRQLIMANPQMQQLLQRNPNISHLLNNPDVMRQTLEIARNPTMMQEMLRNQD
RALSNLESIPGGNNVLRRMYTDVQGPMLNAADQEQIAGNPFASLMTSSSGETQSPRVENR
DPLPNPWVPPASTDTLVGTATPTTSPTQSSNGPQTTLHNLGGRTSNSAGMFNSPGMQSLL
QQITENATLMHNMLSAPYIRSLLNSLSQNPDLAAQMMLNNPLFSGNPQLQQQMRQQLPVF
LQQMQNPEMLSAMFNPRAMQALLQIQQGLQTLATEAPGFIPGVGLGGAVSGLNPAPGLSS
DPAPSDLSSESQVVTETGQRQQQQFVHQMLDALASTNQQAQTEELPFQQQLEQLSTMGFL
NPEANLQALIATGGDVNAAVERLLGSQPS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggataatactgtggatgtggacgagcaaccatccgctgctgaatgtaacatcatcaga
gttactgtgaaaacaccaaaggaaaaagaggaaatcgccattccagagaacagctctatc
aaacagtttaaggagcagatagccgagcggttccaggcacaaacagagcagctggtgctc
atctttgctgggaagatcctcaaagatgcagatctgctgagtcaccaaggcatccacaac
ggactgaccgtccacctggtcatcaagacccagagcaggcctccggagttgtctgcctct
ccttccagcagcactgcctcagaacaggcccaaccggaaggccctacctctgtccctgga
ccccctcctgtaggccctacctctgtccctggaccctctcctgcttcttcagccacttct
accctcagcctgggaggtctggggacagctgctgaggggtctggtctctctgagctgcag
aggcagctaatgtccaaccctgagctgctggcccagattatggacagccccttggtccag
ggcatgctgtccaacccagacacgatgagacagctcatcatggccaacccccagatgcag
cagctgctgcagcgcaaccccaacatctcccacctgctcaacaaccctgacgttatgaga
cagaccctggagatagcacggaacccgaccatgatgcaggaaatgttgcgcaaccaggac
agggcacttagcaaccttgagagcatccctggtggcaacaatgtcctccgcaggatgtac
actgatgttcagggacccatgctcaatgctgctgatcaggaacagattgcaggaaaccct
tttgcttctctgatgacctcgtcgtcaggggaaacccagtcaccccgggtagagaacaga
gaccccctccccaacccctgggttcctcctgcttccacagacacccttgtaggcaccgcc
acacccaccacttcccccacccaatccagcaatggccctcagaccaccctgcacaacctg
ggaggtagaacatctaacagtgcgggtatgttcaatagtccgggcatgcagagtcttctg
cagcagatcactgagaacgccacgctgatgcacaacatgctgtcagccccctacataagg
agcctactcaacagcctgagccagaaccctgaccttgcagcacagatgatgctgaacaac
ccactgttttctgggaacccccaactgcagcagcaaatgagacaacaactcccagtgttc
ctccaacagatgcagaaccctgagatgctgtcagccatgttcaaccccagggccatgcag
gcgctgctgcagatccaacagggactgcagacccttgccactgaggcacctggattcata
cctggggttggactgggaggcgctgtctcaggtcttaaccctgcccctgggttgtcatca
gaccccgcccctagtgacctcagcagtgagtcccaggtagtcacggaaacgggtcagcgg
caacaacaacaatttgtgcatcagatgctagacgctctcgctagcaccaatcagcaggct
cagactgaagagctgccgttccagcagcagttggagcagctgagtaccatgggcttcctc
aacccagaggccaacctgcaggccctcatcgctaccgggggagacgtcaacgctgccgta
gaacgactgctgggctcgcaaccctcgtaa
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