Coregonus clupeaformis (lake whitefish): 121584461
Help
Entry
121584461 CDS
T08357
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03440
Homologous recombination
cclu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121584461 (top3b)
03460 Fanconi anemia pathway
121584461 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121584461 (top3b)
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121584461 (top3b)
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121584461 (top3b)
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Topoisomerases
121584461 (top3b)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
121584461 (top3b)
FA (Fanconi anemia) pathway
121584461 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
EBNA2_Core
Fer4_11
Motif
Other DBs
NCBI-GeneID:
121584461
NCBI-ProteinID:
XP_041756280
LinkDB
All DBs
Position
16:complement(21125432..21188095)
Genome browser
AA seq
857 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSKGSCSSRKGLNGACSVHEYMGTFSGQSVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFTKAPTEKKEANPKLNMVKFLQVEAKGCDYVVLWLDCDK
EGENICFEVLDAIEPVMNRPYGSEQTVYRAKFSSITDTDIWAAMTKLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVIQAKVFKGKESPLTLDWDRVRVFDREVGQMFVNMTKTSREAKVESVSKKEKAKQRPLA
LNTVEMLRVASSSLGMGPQHTMQIAERLYTQGYISYPRTETNHYHENFDLKGTLRQQANN
PFWAQEVKALLSEGLNRPRKGADAGDHPPITPMRAASEGELGSDGWRLYEYIVRHFIATV
SQDCKYLQTTISFIIASEGFSCSGKTLISPGFTEVMPWLGIPLEEAMPVCERGDVFTVEE
IKLVERQTSPPDYLTEADLITLMEKHGIGTDASIPVHINNISQRNYVTVENGRKLKPTNL
GIVLVHGYYKTDAELVLPTIRGAVEKQLNLIAQGKVNYQQVLQHTLDIFKRKFHYFFDTI
ASMDELMEVTFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCAGCDETYSLPQNGAIKL
YKELRCPLDEFELVLWTSGSRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECEGGVLVLDPTSGPKWKMSCNRCNVMVHFFEHAHRVQVAQESCEACEASLVA
VDFNKTRSPLPDGETQHSGCVFCDPVFQDLVELKHATMRHPSMTRGGGARRGGRGRGRGR
REKKPKDKMAALAAYFV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagttttgatggtagcggagaagccgtcgttagctcagtcaattgccaaaatc
ctatctaaaggcagctgctccagtcgcaaaggtctcaacggagcatgttcggtccacgag
tacatgggcaccttctcaggccagagcgtgcgctttaagatgacgtcagtgtgtgggcat
gtcatgagtctggatttcatagggaagtataataactgggacaaggtggacccagctgaa
ctcttcactaaagcccctacggagaagaaggaggccaaccccaaactcaacatggtcaag
ttcctacaggtcgaagccaagggatgtgactacgtggttttgtggttggactgcgacaaa
gagggagagaacatctgctttgaggtcctggatgccattgagccggtaatgaaccgtcca
tacggcagcgagcagaccgtctaccgagccaagttcagctccatcaccgacacggacatc
tgggcggccatgaccaagctgggagagcccaaccgtaacgaggctctgtccgtagacgct
cggcaggagctggacctgcgcattggctgtgccttcacccggttccagaccaagtacttc
cagggtaaatatgggaacctggactcgtccctgatctcctttgggccatgtcagaccccc
acactgggcttctgtgtggagcgccacgacaagatccagtccttcaaaccagagacctac
tgggtcatacaggctaaggttttcaaagggaaagagtctcctctgactctggactgggac
agggtgagggtcttcgacagagaggtgggacagatgtttgtcaacatgactaaaacctcc
agggaggccaaggtggagtcggtgagtaagaaggagaaggccaagcagagacctctggcc
ttgaacaccgtggagatgctccgagtggccagctcctctctaggtatgggtccgcagcac
accatgcagatagcagagcgtctgtacacccagggctatatcagctacccccgtactgag
accaaccactaccacgagaactttgacctgaaggggacactcagacagcaggctaacaac
cccttctgggctcaggaggtgaaggctctgctgtcagagggactgaaccgtcccaggaaa
ggagctgatgctggagaccaccctcccatcacccccatgagggctgcctccgaaggagag
ctaggaagtgacgggtggcgtttgtacgagtacattgtgcgtcacttcatcgccacggtg
agtcaggactgtaagtacctgcagacaaccatctccttcatcatcgcctcagagggtttc
tcctgcagcggaaagacactcatatcacctggcttcacggaggtgatgccatggctgggt
atccctctagaggaggctatgccagtgtgtgagaggggagacgtcttcacagtagaggag
attaaactagtggagagacagaccagccctccagactacctcactgaggccgacctcatc
acactgatggagaaacacggcattggtactgacgccagcatcccggtccatatcaacaac
atctctcagaggaattatgtgacggtggagaacggacgcaagctcaaacccaccaacctg
ggcatcgtcctggtgcacggatattacaagacagatgctgagctggtgctgcctaccatc
cgtggcgctgtagagaaacagctgaacctgattgcccagggcaaggtgaactaccaacag
gttctgcaacacaccctggacatcttcaagaggaagttccactacttctttgacaccatt
gctagtatggacgagctcatggaggtgacgttctctcccatcgctgccaccggcaagccc
ctgtcccgctgcggcaagtgccatcgcttcatgaagtatattcaggccaagcctagccgg
ctgcactgtgctgggtgtgatgagacgtacagcctgcctcagaacggagccatcaagctg
tacaaggagctgcgctgcccgctggatgagtttgagctggtgctgtggacctctggatcc
aggggaaagagctaccctctatgtccctactgcttcagcaacccccccttcagggacatg
aagaaaggtatgggatgtaatgagtgcacccacccgtcctgccagcacagtctcaactcc
ctgggtattggtcagtgtgtggagtgtgagggcggggtgctggttttggaccctacctcc
ggccccaagtggaagatgtcctgcaacaggtgcaacgtgatggtccacttctttgagcac
gcacacagagtgcaggtagcccaggagagctgtgaggcgtgcgaagcgtccctggtagcg
gtggacttcaacaagacgcgctccccgctccctgacggagagactcagcacagcggctgt
gtgttctgcgacccagtcttccaggacctggtggaactcaaacacgccaccatgagacac
ccttccatgacccgtggcgggggtgcacggcgaggggggcggggcaggggcagggggcgc
agagaaaagaaacccaaagataagatggctgccttggcagcgtacttcgtgtag
DBGET
integrated database retrieval system
