Coregonus clupeaformis (lake whitefish): 121584475
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Entry
121584475 CDS
T08357
Symbol
zfr
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121584475 (zfr)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121584475 (zfr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
Colicin_Ia
zf-U1
Motif
Other DBs
NCBI-GeneID:
121584475
NCBI-ProteinID:
XP_045081539
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All DBs
Position
16:complement(6808237..6886005)
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AA seq
1090 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQAGPVAYSQPTTVASYTVH
QAPMAAHTVAAAYAPTGATVAVARPAPVAVAAAATAAAYGGYQPAHATADYGYAQRQPDV
PPPPPPVTSQNYQVGYQDSYSYVRATAPAVTYDPKQYYQQPVASAAVAVLPQPTAESYYQ
TASLNTSWDTTWKKTLPAPKTGYSQPSLTPYTQQSRQVTAIKPATPSPATSTFSIYPVST
VQPVAAVASVVPSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASTYYQQQQQQQKQAVGW
TGSTFTKKPPFQSKQLKPKQAPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKETALK
VSQSSSSGGGGVGSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPI
PSTEPSVVTQTPTSTTAAPSKTPSSHPHGSTTTASSLPPSSNSSYLKPVNIVSQGGAGAG
LGKGLAVNNLSAATTAVKKVNTPKINFVGGSKLQTTGKVTEEAKVEASKPPPPSLVPQPQ
ETKNESSDSLSTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHL
KGRRHRLQYKKKVNPELQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRR
YEEDMYWRRMEEDHHWDERRGGPRMPGDGPYLQGPPGPPGLLGVRPGMPIPQPQGPVPPR
RPDSSDDRYVMTKHAAIYPSEDELQTIQKIVSITERALKLVSDIIIDQDKTKETTGEEKD
AKEVSKTPQDRALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKNLLSRIVEHLPKQL
TLVTPEKYEVKGSIQDSSIILMSGADPKMTVTITLTSPVIREEETPATPPPRDGDVTGGL
VRDPADVLDRLKCLDALADLRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPSWA
MELLVEKAISSASGPLSPGDALRRVFECISSGILLPGGPGLVDPCEKNPTDTLTTMKEQH
REDITSSAQFALRLLAFRQVHKVLGMDPLPQMNPRFNIRNNRKRRRENSDGTDGFEGEGK
KDKKDLDSSY
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagtggtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaactactttggatttacccacggtgctgctgcacagtacagt
cagcaggcgggcccggtggcctactcccagcctaccactgtggccagctacacggtacac
caggcaccgatggcggcccacactgtggcagcagcctacgctcccaccggcgccacagtt
gccgtagccaggcccgcccccgtcgccgtggcagcagcagccaccgccgcagcctacgga
gggtaccagccggcgcacgccaccgccgactacggctacgcacaacgccagccggacgtc
cccccgccgccccccccggtcacctcccagaactaccaggtgggttaccaggactcctac
tcctacgtgcgggccacggcgccggcggtaacctacgaccctaagcagtactaccagcaa
cccgtagctagcgctgcggtagccgtactgccccaacccacggccgagtcgtactaccag
accgcttcccttaacacatcctgggacaccacatggaagaaaaccctaccagcccctaaa
accggttacagccagcccagtctgactccttacacccaacagtctcgtcaggtgacggcc
atcaagcctgccacgccctcccccgccacctccactttctccatttaccccgtctccacc
gttcagcctgtagccgccgttgcctcagtcgtcccctcctactctcagagccccacgtac
agcaccaacgcagtcacgtactctggtacctcgtactccggctatgaggcggctgtgtat
tctgctgcctcgacctactatcagcagcaacaacagcagcagaaacaggcagtaggctgg
accggcagcaccttcaccaagaaacctcccttccagagcaagcagctgaagcccaaacag
gcgcccaaaccaccacagatccactactgtgacgtctgtaagatcagctgtgccggacca
cagacctacaaggaacacctggagggccagaagcacaagaagaaggagactgccctaaag
gtgtcccagagcagcagcagcggtggtggaggagtgggctcggcccgggggactcagaac
cagctacgatgtgagctctgtgacgtctcctgcaccggcgccgacgcgtacgctgcacac
atcagaggagccaagcaccagaaggtggtgaagctccacaccaagctggggaagcccatc
ccctccacagagcccagtgtagtgacccagacccccacctccaccacggcagccccctcc
aaaacaccctcctcccacccccacggctccaccaccaccgcctcctccctgcccccctcc
tccaactcctcctacctgaagccggttaacatcgtcagccagggtggtgctggggccgga
ctggggaaaggtctagcggtgaacaacctatcagcagccaccacagctgtcaagaaggtc
aacacccccaagatcaactttgtcgggggaagcaagctccagactactgggaaggtgacc
gaggaagccaaggtggaggcatccaagcctcctccgccctcattggtcccccaacctcag
gagacgaagaacgagtcctctgattcgctgtccaccctggccgccctgcagagtgacgtg
cagcctgttggacacgactatgtggaagaggtgcgtaatgacgaaggcaaggtgatccgg
ttccactgcaagctgtgtgaatgtagcttcaatgatcccaatgccaaagagatgcatctg
aagggcaggagacaccgcctgcagtacaagaaaaaggtgaacccagagctgcaggtggag
gtgaagccctctatcagagccaggaagatccaggaagagaagatgaggaaacagatgcag
aaggaggagtactggaggaggagagaggaggaggagagatggaggatggagatgaggcgt
tatgaggaggacatgtactggcgtcgtatggaggaggaccaccactgggacgagagacgt
gggggacccaggatgccaggggatgggccttacctccaggggccacctggacctcctgga
ctactgggggtccgacctggcatgcccatccctcaaccacagggacctgtacctccccgt
cggccggactcgtcagacgaccgctacgtgatgacgaagcacgcagccatctacccctct
gaggacgagctgcagaccatccagaagatcgtctccatcacagagagagccctcaaactg
gtctcagacatcatcatcgaccaggacaagaccaaggagactactggggaggagaaggat
gcaaaagaggtctccaagactccccaagaccgagctcttaaaggggtgatgagggtgggg
gtgctggctaaaggactgctgctccgtggagacaagaatgttaacctggtcctgctctgc
tcagagaaacccaccaagaatctgctaagccgcatagtggagcatcttcccaagcagctg
acgctggtgaccccagagaagtacgaggtgaagggctccatccaggactcttccattatc
ctgatgtctggagccgaccccaaaatgacagtcaccatcaccctgacctcccctgtcatc
cgagaggaggagacccctgccacacccccgccacgggacggagatgtaaccgggggcttg
gtgcgagacccggcggacgtcttggacaggctaaaatgccttgacgctctagcggatctc
cgccacgctaagtggttccaggctagggccaacggactccaatcctgtgtgattgttatt
cgtatcctgcgtgacctctgtcagagggttcccacgtggtccgccttccccagctgggcc
atggagctgctggtggagaaggccatcagcagtgcctccggccccctgagtccaggcgat
gcactgcgacgagtctttgaatgtatttcctccgggatcctgctccccggtggtccgggg
ttggtggacccgtgtgagaagaaccccactgataccctgacaaccatgaaggagcagcac
agggaggacatcacctcaagtgcccagttcgctctgcggctgctagcgttccgtcaggtg
cacaaggtgctgggtatggacccactgccccagatgaacccccgcttcaacatccgcaac
aaccgtaagcgtcgccgtgagaacagcgacgggacggacggattcgagggcgaagggaag
aaggacaagaaggatttggacagtagttactag
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integrated database retrieval system
