Coregonus clupeaformis (lake whitefish): 121584492
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Entry
121584492 CDS
T08357
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121584492
04371 Apelin signaling pathway
121584492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121584492
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
121584492
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
121584492
NCBI-ProteinID:
XP_041756319
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Position
16:complement(15090665..15194627)
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AA seq
480 aa
AA seq
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MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEEKYRKI
NEDIDLMISRQRLCQGVPSSNYEMPVSIPVSNQNSLIYSHPGGSLGNHNLLPLAHHMQRN
SMSPSVTHRPPSAGGLMGADLTTGAGTSAGNGYGNHHRNSPGLLVSPGNMNKSMQAKSPP
TMNLGMNSNRKPDLRVLVPPGAKNNMPSISEDVDLLLNQRINNSQSAQSLATPVVSVATP
TLPGQGMGGYPSAMSTSYGTEYSLSSADLSSLSGFNSGSSLHLGSMSGWQQQHLQNMQQH
SALSQLGNCNSNHLCHNSNLSLPSAQSLHIKSEPVSPPRDRTSSTPGGYGVPQQQNPSSR
QDSGRSPVDSLSSCSSSHEGSDRDEHRNEFHSPLGMSRPALDGRESPSVKRVRLSEGWAT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacgcggattatggatgaacgcaacagacaggtgacg
tttacaaagaggaagtttggcctgatgaagaaggcgtatgagctgagcgtgctgtgtgac
tgtgagatcgccctcatcatcttcaacagcaccaacaagctgttccagtatgccagcact
gacatggacaaggtgctgctcaagtacactgagtacaacgagccccacgagagcaggacc
aactctgacatcgtggaaacgttgagaaagaagggcctaaatggctgtgacagccctgac
cctgacgcagacgactccgtcggccacagccccgagtctgaggaaaagtacaggaaaata
aacgaagacattgatctgatgatcagcagacagagactgtgtcagggtgtgccctcctcc
aactacgagatgccggtgtccatccctgttagcaaccagaacagtctcatctacagccac
ccaggaggttccctaggcaaccacaacctgctgcccctggcacaccacatgcagaggaac
agcatgtcccccagtgtcacacatagacctcccagtgcaggtggcctcatgggtgctgac
ctcaccactggcgcgggcaccagtgctggcaacggctacgggaaccaccaccgtaactcg
cccggtctactggtctctccgggcaacatgaacaagagcatgcaggccaagtctcccccg
accatgaacctgggtatgaacagcaaccgcaagcctgacctgcgggtgcttgtcccccct
ggagccaagaacaacatgccctccatctctgaggatgtcgatctgctattgaaccagcga
ataaataactcccagtctgcacagtcattggccacccctgtggtttctgtagcaacgccc
accctacctgggcaaggcatgggcggttacccatcagccatgtccacttcatacggtact
gaatactcactgagcagtgcagacctgtcctccctgtccggctttaacagtggtagctcc
ctccacctgggctccatgagcggatggcaacagcaacacctccagaacatgcagcagcac
tctgccctcagtcagctggggaattgcaatagcaatcacttatgtcacaattcaaatctc
tccctgccttctgctcaaagcctgcacatcaagtccgaacctgtttctcctcctagagat
cgcaccagcagcacaccggggggctacggcgtcccacagcaacagaacccctcgtcccgc
caggactcaggccgctcccctgtcgacagcctgagtagctgcagcagctcccacgagggc
agcgaccgcgacgagcacaggaacgagttccactctccactgggaatgtcccggcctgcc
ctggacgggcgcgagagcccctcggtcaaacgcgtgcgcctgtccgagggatgggccaca
tga
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