Coregonus clupeaformis (lake whitefish): 121584523
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Entry
121584523 CDS
T08357
Symbol
myo1ha
Name
(RefSeq) unconventional myosin-Ih
KO
K10356
myosin I
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121584523 (myo1ha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121584523 (myo1ha)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584523 (myo1ha)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121584523 (myo1ha)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121584523 (myo1ha)
04147 Exosome [BR:
cclu04147
]
121584523 (myo1ha)
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121584523 (myo1ha)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Others
121584523 (myo1ha)
Others
Actin-binding proteins
Myosins
121584523 (myo1ha)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121584523 (myo1ha)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121584523 (myo1ha)
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121584523 (myo1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
Zeta_toxin
AAA_22
NPHP3_N
TsaE
Motif
Other DBs
NCBI-GeneID:
121584523
NCBI-ProteinID:
XP_041756378
LinkDB
All DBs
Position
16:16918759..16938529
Genome browser
AA seq
1024 aa
AA seq
DB search
MEGALTARDRVGIQDFVLLDAHTNETAFLDNLKKRFSEDLIYTYIGTLLVSVNPYKELDI
YSKKQMDIYMGVNFFELPPHIYALADNAYHTMMSEANNHFILISGESGAGKTEASKKILQ
YYAVSCPSTTLLDSVRDRMLVSNPVLEAFGNAKTLKNDNSSRFGKYMDIQFDIQGDAVGG
HILSYLLEKSRVVHQNHGERNFHIFYQLVEGGEEDLLHQLGLESNCQHYSYLVQDECANV
TSINEKNDWKTVRNALSVIDFDESDIQHLFGIIASVLHLGNVQFEADSKGYATLNNNTEL
RWVSTLLGINVQVLQEGLTYRKIEAKTDEVLSPFTVDHAIYARDALAKAIYGRTFTWLVN
KINDSMENKEPSRKTVIGLLDIYGFEVFYVNSFEQFCINYCNEKLQQLFIQLTLKSEQEE
YEAEGIGWEPVQFFNNKIICDLVEEKHRGIISVLDEECLRPGEATDFTFLERLEEKMGSH
PHFITHKLSDKKTRKTLDRGDFRLLHYAGEVTYCVVGFIDKNNDMLYRNIKDVMRQSKNA
IVRECFASTESDSRRRPETVASQFKSSLLGLTDILMSKEPWYVRCLKSNESKQPGRFDNV
LVRHQVKYLGLMEHLRVRRAGFAYRRRYEVFLQRYKPLCPATWPHWRGVAAEGVEVLVQH
LGYLPDEYKMGRTKIFIRHPRTLFATEDAFEVCKHKLASRIQAQYKGYRQKGEFRRQKEA
ATKIETCWRGVQARKEKERRQWAVKVIKKFIKGYMTRGEAKTTDNSEYLAFVRQNYLNRL
KDNLPKTVLDKTSWLTPPPVLTEASAILRQLHMRLMVTRYVRGITAQQKAQLQLKGITSV
IFKGKKDSYPQSVCQPFVDTRISEQDINMKVLQIIRHERVKYSVPVVKYDRNGFKPRPRQ
LILTQMAAYAVDEAKIKQRVQYTNLKGVSVSTLSDGIIIFHIASEDVKQKGDLVMQCDHL
FEVLTKLSVVANKQSAINVVQGSIKFQIQAGKEGIVDFSSGQESMVYKDKNGHLMVVSTR
TRAR
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggagggggctctgaccgcccgagaccgcgtggggatccaggactttgtcctgctggac
gcccacaccaatgagaccgctttcctagacaacctgaagaaacgcttcagtgaggacctc
atctatacgtatataggcactctgctagtgtctgtgaacccctacaaggagttggatatc
tacagcaaaaaacagatggatatatacatgggtgtcaacttttttgagcttccaccacat
atttatgccctggcggacaacgcctaccacaccatgatgtctgaggccaacaaccatttc
atcctcatctctggggagagtggtgccggcaagacagaggcttccaagaagatcctgcag
tactatgctgtgagctgccctagtaccaccctactggacagcgtcagggaccggatgctg
gtgtccaaccctgtgctggaggctttcggcaacgccaaaacactgaagaatgacaactct
agtcgctttggaaagtacatggatatccagtttgacatccagggggatgccgtggggggc
catatcctgagctacttgctggagaagtccagagtggtccaccagaaccacggagagagg
aacttccacatcttctaccagctggtggagggaggggaggaagacctgctgcatcagcta
ggccttgagagcaactgccagcactacagctacctggtgcaagacgagtgtgccaatgtg
acctcaatcaatgagaagaacgactggaagacggtgagaaacgccctgtccgtcatcgac
tttgacgagagtgacatacaacacctatttgggatcatagcaagcgtcctccacttaggg
aatgtgcagtttgaagctgacagcaaaggctatgccacattgaacaacaacacagaactc
cgctgggtgtcaacattgctggggatcaatgttcaagtactgcaggaggggctgacatac
aggaagattgaggccaaaacagatgaggtgctcagcccattcacagtggaccatgccatc
tatgccagagatgccctggccaaagccatctatggacgcacctttacctggctggtcaat
aagataaatgattccatggagaataaggaaccgtcaaggaagacagtcattggtctcctt
gacatatatggctttgaggttttctatgtcaacagttttgagcagttctgtataaactac
tgcaacgagaaactgcagcagctttttatccagctgaccttgaagtcggagcaggaggaa
tacgaggcagagggcattgggtgggagcctgtccagttcttcaacaataagattatctgt
gatttagtggaggagaaacacaggggcatcatttcagtactggatgaagagtgcctgagg
cctggagaggccactgacttcacatttctggagaggcttgaggagaaaatgggcagtcac
cctcatttcatcacgcacaagctgtctgacaagaagacacgtaagacgctggataggggc
gactttcgccttctgcattatgctggggaggtcacctactgcgttgtggggttcatcgac
aaaaacaacgacatgttatacagaaacatcaaagatgtgatgcggcagtctaaaaatgcc
atagtcagagagtgctttgcttccacggagtcggatagcaggcggcgaccagagacggtt
gctagccagtttaagagcagtctgctgggactgacagacatcctcatgtctaaggagccc
tggtatgtgcgctgcctcaaatccaacgagtccaaacagccaggccgttttgacaacgtg
ctggttcggcaccaagtgaagtacctggggctgatggaacaccttagggtcagacgggca
ggttttgcataccgacgccgctacgaggtgttcctgcagagatacaagcccttatgccca
gccacctggccccattggagaggagtggctgcagaaggagtggaagtgctggtgcagcac
ctgggatacctaccagatgagtacaaaatgggcagaaccaagatatttatccgccacccc
aggacactttttgccacagaggatgccttcgaggtctgcaaacataaacttgcatcaagg
attcaggcccagtacaagggataccggcaaaaaggagaattcagaagacagaaagaagct
gccaccaagattgagacttgctggagaggagtacaagccaggaaagagaaagagaggaga
caatgggctgtcaaggtcatcaagaagtttattaaaggatacatgaccagaggggaggca
aagactactgataactctgaatacctggcctttgtcagacagaactacctaaacaggctg
aaagacaatctcccaaaaacggttctggataaaaccagctggctaacccctccacctgta
ttgacggaggcctcagcgatcctgcgtcagctccacatgcgtctcatggtgacgaggtac
gtcagagggatcactgcacaacagaaagcacagcttcaactcaaggggatcaccagtgtc
atcttcaagggcaagaaggacagctacccacagagtgtctgccaaccctttgtggacacc
aggatcagtgaacaggacatcaatatgaaggtcctgcagataattcgccatgaacgcgtc
aagtacagcgtaccagtggtgaagtatgacaggaatgggtttaaaccccgacctcggcag
ctcatcctcacgcagatggctgcctatgcggtggacgaggccaagatcaaacagagagtg
cagtacactaatctgaaaggtgtgtctgtcagtaccttgagtgacggcatcatcattttc
catattgcaagtgaagacgttaagcagaagggggacctggtcatgcagtgtgaccacctg
tttgaagtgttgaccaaactcagtgtggtcgccaacaagcagagcgctatcaacgtggtc
cagggcagcatcaagtttcagatacaggcggggaaagagggcattgtggacttcagcagt
ggccaggagtccatggtgtacaaggacaagaatggacacctcatggtggtatccactcgg
accagggctcggtga
DBGET
integrated database retrieval system