Coregonus clupeaformis (lake whitefish): 121584525
Help
Entry
121584525 CDS
T08357
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121584525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121584525
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121584525
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121584525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
121584525
NCBI-ProteinID:
XP_041756380
LinkDB
All DBs
Position
16:16946029..16963552
Genome browser
AA seq
1067 aa
AA seq
DB search
MFSATQSSKSEFLDKARQAREERKGYKERERAATLIQALVRRFLCRCRLQKQIRKEVDDF
FQDVGTTKRNALSIFKIARKLLFIYCQDDKLRFEKLCRSILGSMEVENEPKVWYVSLALS
KDLTIPWIKQIKDVLWVSCHFLKKLKPDILQDNKLVTLHLTMLVTFTDTSTWKIVRGKGE
ALRPVLTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAIFTLALRPVIAA
HFSDNLLRSLLIHIMSVPAVVSHINTITPECMATIQTHDLLRKFTLFLSREEQCVDICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVKDLTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIRTLFSDVLSKKLETQEATPPPQSQPTTSQ
NNLPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVQKVCSICVLYQTALTTLTQIRLQI
LTGLTYLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSRHLIT
ILDDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENAKGEKLDLFHSVHGWLMVL
YERDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNII
TKEKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVD
EAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKM
LGKAMYEGIVVDVPFASFFLSQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVG
DLGLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFIR
GYRSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILS
SDFSAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTI
RKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYATSMNTGFELS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcaactcagagttccaagtcagagttcctggacaaagccaggcaggcgcgt
gaagagaggaaggggtacaaagagagggagagagcagccactcttatccaagcgctggtc
aggagattcctctgtcgctgcagactccagaagcaaataaggaaagaggttgatgacttc
tttcaagatgtcgggacaacaaaaagaaacgcactatccatttttaaaattgcacggaag
ttgttattcatttattgtcaagatgataaactgagatttgagaagctttgtcgctccatt
cttggtagcatggaggttgaaaatgagcccaaagtttggtatgtgtcattggccctttcc
aaagacctcaccatcccatggatcaagcagatcaaagatgttctgtgggtctcctgtcat
ttcctgaaaaaattaaagcctgacatccttcaggacaataagctggtgactttgcacctt
accatgctggtgaccttcacagacacatcaacctggaagatagttagagggaaaggagag
gccctcaggccagtgttgacccggatctgtgagaacatcatggggcatctcaatcaaaag
ggattttattcaatactgcagattctactcaccaacggattggcgcgctccaggccctct
cttaccaagggcacactcacagcaatattcacattggcattaagacctgtcattgctgct
cacttctctgacaacctgctgaggtctcttctcatccacatcatgtctgtcccagctgtg
gtctcccacatcaacaccatcaccccagagtgcatggccaccatacagacccacgacctg
ctgaggaagttcaccctgttcctgagccgcgaggagcagtgtgtcgacatctgtgtctgc
ctggaggggagccacacactgtgcttactgggtaacctgattcacctgggctacctcaat
gagaaagtcctggaggaggaggccaaccactttgtgaaggacctgacggacatgctgtcc
tactgccagagatacgtgtcccagaagaaatccaacctcactcactggcacccggtccta
ggctggttttcccaaactgtagactacggtctgaatgagtccatgccactggtcaccaag
cagctgcagtacctgtggggcatgcctgtgatccggactctcttcagtgacgtcctcagc
aaaaagcttgagacccaagaggccacgcctccaccacagtcacagcctaccacgtcacag
aacaacctgccagtcaagagcctctttaagcgggcgtttcagaagtctgcttcggtgcgc
aacatcttgaagccggtcggcgggagacgagtggactccgctgaggtgcagaaggtgtgc
agtatctgtgtactgtaccagacagccctcaccacgctcactcagatacgactgcaaatc
ctcactggcctaacctacctggacgacctcctgcctaagctgtgggccttcatctgcgag
ctaggcccccagggaggcctcaagctgttcatggagtgcctgaacaacgacacagaggag
tctaagcagctgctggccatgctcatgctgttctgtgactgctccagacacctcatcacg
atcctggatgacattgaggtttacgaggagcagatatcgtttaagacagaggagcttgtc
accatctcctcgtttctcaacacgtttgtgtacaagatggtctgggacggcatcttagag
aatgccaagggggagaagctggacctgttccacagtgttcacggctggctgatggtgctc
tacgagcgggactgcaggaggaggttctcccctgatgacaactggctgcgcaaggatctg
aagccaagccttttgttccaagaactggagaagggtaagaggagagctcagctgttactt
cagtacatcccacacgtcattccccacaaaaacagggttctgctgttccggaacattatc
accaaggagaaggaaaccttgggattggtggagacaagctccgcctctccgcatgtcacc
catatcaccattcgccgctcacggatgttagaggatggttatgaccagctccgccggttg
cctgtcaactccatcaaaggcgtgatccgtgtgaagtttgtcaacgaccttggtgtggac
gaggccggcatcgaccaagacggcgtcttcaaggagttcctggaagagatcatcaagaaa
gttttcaacccggcactcaacctctttaagaccaccagtggcaacgagaggctgtacccc
tctcctacgtcctacatccacgagaaccacctgcagctttttgagtttgtggggaagatg
cttggcaaagcaatgtatgagggcatcgtggtggacgtacccttcgcctccttcttcctc
agccaggtcatgggtcaccaccacagcaccttctacagctccatcgacgagctgccctcc
ctggactctgagttctacaagaacctcacctccatcaagcgctacgacggggatgttggt
gatttgggactgacgctatcgtatgacgaggatgttatgggacagctggtctgtcacgag
ctgattcctggaggaaagacgatgccagtcacaaacgaaaacaagatcagctacatccat
ctgatggcgcacttccgcatgcacacgcagatcaaggagcagacagcagctttcatccga
ggataccgcagcatcatcaaccccgagtggctgcacatgttctccacccccgaggtccag
cgcctcgtctctggggacaacgccgagattgacctggacgacctcaagaaacacacagtt
tactatggaggtttccacagcagccatcgggtcatcatctggctgtgggacatcctgtcc
agtgacttctccgctgaggaaagggccatgttcctcaagtttgtcaccagctgttcaaga
ccccccctcctaggttttgcctacctcaagccccctttctccatccgctgtgtggaggtg
tctgacgatcaggacactggcgacaccctaggcagcgtcctccggggtttcttcaccatc
cggaagaaggaaccaggcggtcgcctccccacctcgtccacctgcttcaacctgctcaag
ctgcctaactacagcaagaagagcatcctgcgtgacaagctccgctacgccaccagtatg
aacacaggttttgagctctcctaa
DBGET
integrated database retrieval system
