Coregonus clupeaformis (lake whitefish): 121584581
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Entry
121584581 CDS
T08357
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121584581
03041 Spliceosome [BR:
cclu03041
]
121584581
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121584581
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121584581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
121584581
NCBI-ProteinID:
XP_041756477
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All DBs
Position
16:complement(59029718..59100200)
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AA seq
579 aa
AA seq
DB search
MMMAELVQGQASVAQSGMKADGFADALHRSRQMAGTMGNEQIPHLNNSPPIVDPSMYGYG
GQKRSVEDGVGNPLGAMVHQRAVMTEDFKVPDRMVGFIIGRGGEQVTRIQMESGCKIQID
SESGSVMDRACSLTGTPESIEQAKRMLGQIVDRYRNGPGFHSEAEDNSSVQEMLIPASKV
GLVIGRGGDTIKQLQERIGVKMMMIQDGPMPTGVDKPLRITGDPYKVQQARELVIEIIRD
KDQGDFHSGRNDFASRLGGSTLDANPSLQVAVPRFAVGIVIGRSGEMIKKIQGDSGVRIQ
FKPDDGISPERIAQVMGQPDRCQHAVHLINELIQTAQERDDFGSSGGPRGRGRGHWGMGS
PGGLQEVTYTIPADKCGLVIGKGGDTIKSINQQSGAHVELQRNPPPNTDPNVRVFSIRGT
PQQMEVACQLIDDKIGGSGIVSNGSFGFSPYTQSPATHQNCGSGAQTLMTGGWGTAYQTW
QPQGQQDHSHNGSQAGQMDYSKAWEQYYKKLGQTSQQQSSLPEYSAAMAEYYRQQGAYLW
PGAQATQGPGLQPPHNCQSSSPSCLYIPSTQPALQLSAP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcggagttggtgcagggacaggcctccgttgctcagtccggaatgaaagct
gacggcttcgccgacgctttacatcggtctcgacagatggcaggaacaatggggaatgag
cagattcctcacctaaacaattccccccctattgtagacccctccatgtatggctacggg
ggccagaagagatcggtggaagacggagtaggtaacccgctgggcgccatggtacatcaa
agggctgttatgacagaagactttaaagtgcctgatagaatggttggattcatcataggc
agaggaggtgaacaagttacgagaatccagatggagtctgggtgcaagattcaaattgac
tctgagagtggcagtgtgatggacagagcctgctcccttactggaaccccagagagcatt
gagcaggccaagagaatgcttgggcagatagtggaccgctatcgaaacggccctgggttc
cacagcgaggctgaggacaacagctcagtccaggagatgctcatcccagccagcaaagtg
ggcctggtcatcgggaggggaggggacaccatcaagcaactgcaggagagaataggagtg
aagatgatgatgatccaggacggccccatgcccactggggtggacaaacccctgagaatc
actggggatccctacaaggtccagcaagcgcgggagttggtgatcgagatcatccgcgac
aaagaccagggagacttccacagtggccgcaacgactttgcgtcaagattgggtggaagt
actttggatgccaatccctcccttcaggtggctgtgcccaggtttgcagtggggatcgtc
atcggcaggagtggcgagatgatcaagaagattcagggtgattccggagtgaggatccaa
ttcaaaccagatgatggcatcagcccagagcgcatcgcccaagtgatgggacaaccagac
agatgtcagcacgctgtccatctcatcaacgagctcatccaaacagcccaggagcgtgat
gactttgggagctctggaggaccaagaggaaggggacgaggccactggggcatgggctca
ccaggggggctgcaggaggtcacctacacgatacctgcagacaagtgtggtctggtgatc
ggcaaaggcggagataccatcaagagcatcaaccagcagtctggagcccacgtggagctg
cagaggaacccccctcccaacaccgaccccaatgttcgcgtcttctccatcagaggcacc
ccgcaacagatggaggtagcatgccagctcatcgacgacaagatcggaggctcaggaata
gtgagcaatggtagttttgggtttagcccttacactcaaagccctgcaactcatcaaaat
tgtggcagtggagcccagactttaatgacagggggatgggggactgcctatcaaacatgg
cagcctcaaggccagcaagaccacagtcacaatggatcccaggcaggccagatggactac
tctaaagcatgggagcagtattataaaaagctaggtcagacatctcagcagcagagctca
ctcccagaatacagtgcagctatggcagaatattacaggcagcagggagcgtacctctgg
ccgggtgcacaggcaacccagggcccaggtcttcagcctcctcataactgccagtcatcc
tctcccagttgtctctacattccttcaacgcaacctgctttacagctctccgctccatga
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