Coregonus clupeaformis (lake whitefish): 121584620
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Entry
121584620 CDS
T08357
Symbol
snx2
Name
(RefSeq) sorting nexin-2 isoform X1
KO
K17917
sorting nexin-1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121584620 (snx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584620 (snx2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121584620 (snx2)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Macropinocytosis
Sorting nexins
121584620 (snx2)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121584620 (snx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
V-ATPase_G
HR1
DDE_Tnp_1_3
Motif
Other DBs
NCBI-GeneID:
121584620
NCBI-ProteinID:
XP_041756546
LinkDB
All DBs
Position
16:complement(52578978..52607779)
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AA seq
521 aa
AA seq
DB search
MAAEMEPPPLGDAGQTDFREIEDGEGLFVSTVTTLESPEPSSPDPASMPAEGISTNSNGP
KQEDISLDDDPEDLFAEATEEVSLDSPEREPILSDGPSPAITPITPTAMLTPRMGLGTAE
MFERSLDEIEEDDSGDIFDMHIAVSDPEKVGDGMNAYMGYKVTTKTSMTIFSKNETTVRR
RFSDFLGLHSKLASKYLHIGYIVPPAPEKSIVGMTKVKVGKEDLSSAEFVEKRRSALERY
LMRTVKHPILLKDPDVMMFLESSELPRAVSTQALSGAGILRMVNKAADAVNKMTIKMNES
DAWFEEKHQQFENLDLQLRKLHASVESLVCHRKELSVNTASFAKSAAMLGNSEDHTALSR
ALSQLAEVEEKIDQLHQDQAYADFYLFSELLGDYVRLITAVKGVFDHRMKTWSKWQDTQL
LLQKKREAEAKLQFANKPDKLQQAKDEIKEEIEELEGKVQQGEKDFELISKTIRKEVSRF
EKDRVKDFKVVIIQYLESLVQTQQQLIKYWEAFLPEAKAIA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagatggaacctccaccactgggagatgcaggacagactgacttcagggag
atagaagatggagaaggcctttttgtcagtactgtcactacgctagagtctccagaaccc
tcatctccagacccagccagcatgcctgcagaaggcatcagtacaaactccaatggacct
aagcaagaagacatttcattagatgatgacccagaggatctgtttgcagaagcaacagag
gaggtttctctggacagcccagagagggagcccatcctgtcggacggtccatctccggcc
atcaccccaatcacccccacagctatgctcacccccaggatgggcctgggcaccgctgag
atgtttgagagatccttggatgagattgaagaggacgatagtggtgacatctttgacatg
catatagcagtgtccgatccagagaaagttggggatggaatgaacgcttacatgggatac
aaagtaacaacaaagacctctatgacaattttcagcaagaatgaaacaactgtaaggagg
aggtttagtgactttctgggcttgcacagcaaactagcctccaagtacctgcatatagga
tacatagtccctcccgctccagagaaaagcattgtgggaatgactaaggtcaaagtgggg
aaggaggatttgtcttctgcagaatttgtcgagaagagaagatcagccttagaaaggtat
ctgatgagaacagtgaaacatcccatcctgctgaaggatccggatgtcatgatgttcctg
gagagttcagagctgccgagagcggttagcacccaggcgctgagtggggccggaatatta
aggatggtaaacaaagctgccgacgctgtcaacaaaatgacaatcaagatgaatgaatcg
gatgcgtggtttgaggagaagcaccagcagtttgagaaccttgacttgcaactcagaaaa
ctgcatgctagtgtggagtctctggtctgccaccggaaagagctgtcggtaaacacggca
tccttcgccaagtcggcagccatgctggggaactcagaggaccacacagctctgtcgcgg
gccctgtcgcagttggccgaggtggaggagaagatcgatcagctgcaccaggaccaggct
tatgctgatttctacctgttctctgagctgctgggggactatgtacgcctcatcactgca
gtcaagggtgtatttgaccacaggatgaagacttggtccaagtggcaggacacccagctc
ttgctgcaaaagaagcgtgaggctgaggccaaactccagttcgcaaacaagcctgacaag
ctacagcaggctaaggacgaaatcaaagaggagattgaggagttggaggggaaggtccag
caaggtgaaaaagactttgagctgatttccaaaaccattcgaaaagaagtgagccgattc
gagaaggatagggtgaaggacttcaaagttgtcattattcaatacctggagtcgcttgtg
caaacacaacagcagctgataaagtattgggaggcgttcttacctgaagccaaagctatc
gcataa
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