Coregonus clupeaformis (lake whitefish): 121584622
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Entry
121584622 CDS
T08357
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Gene cluster
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
121584622
NCBI-ProteinID:
XP_041756548
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Position
16:complement(52622328..52669026)
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AA seq
890 aa
AA seq
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MDAPEYLDLDEIDFTDDSVYSVTSLKNIPELSRRNDGQGEERQAPAINWSRGVSSHSGGG
IKPTGIADVHSKFRPVKRVSPLKHQPETSDNESDSKAQAHNGEGSSKEEASDKTPAACEG
QGFKAKSLGTGGALFGELEHYDLDMDEILDVPYIKSSQHVSTLPRVPPDKRMVGGGGSAT
DRCQSVKTSTLPHPESLASVTQYCVLSPVKWSDMRKLKSLDPDNHRPPTGGYDHSTPSSL
SCSSASDVDKPLANRAYPEPQAHKTGGDTPGSSQAMMSPLQGCAGARQDNSKTWSSTRLH
GECDEETKKSQNIINIIREGQISLLPHLAADNLELIQDEEGNNLLHISAAQGHADCLQHL
TSLMGEDCLNERNNHQLTPAGLGVKNGHLECVRWMVSETEAIAELSCSREHPSLIHYAAR
YGQEKVLLWLLQFMQEQAISLDEVDQYGNSAVHVAAQYGHLTCIQTLVEYGSNVTVQNQS
GERPSQSAERQGHTTCARYLVVVETCMSLASQVVKLTKQLNEQATKTIAVQNQVQLLLDP
SKAEGTSSRSPRSDLPPLSHVPSVEAWPEMTLTAEGTPGDGHWILRQRSVDSDTVLRQLL
GKDISDKVCTKEKLSLEFQEGSRAGPPNLNGANPGPLRRMGVVERRELKLARLKQIMQRS
LSESDSDTYPPEEAKHAPPPGVRLERPSHLPIAESEEPVGSLHLGMKKHTSTTEHKSAFA
LSTSKSMDGYPSPTSDKSEPDADGKPEAGGDFPDYNNGQKITTSPKSALKSPTSRRKTSQ
NLKLRVTFDEQVVHKTGPPESEPPKGAHSKEGAGGRTPTGSETVKRPFGTFRSIMESLSG
NQNSNNNNAQTSPSVKQSSCGVSQGSPGRKTEVKTSPGGHSKGKSKASAV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcctgagtacttggatttggatgagattgacttcactgatgattcagtgtat
tctgtgacatccttgaagaacattccagagctgtccagaagaaacgatggtcagggagaa
gaaagacaagccccagccatcaactggagccgtggtgtgtcgtcacatagtggcggtgga
atcaagccaaccggcatcgccgacgtccacagcaaattccgacctgtgaagagggtctcg
ccactcaaacatcaaccggagacctctgacaatgagagcgacagcaaggctcaggctcac
aatggggaaggcagcagcaaagaggaggcctcagacaaaacacctgcggcctgcgaaggc
cagggatttaaagccaagagcctgggcaccggaggagctctttttggggagctggagcac
tacgacctggacatggatgagatactggacgtgccttacattaaatccagccaacatgtc
tctactcttcccagagttccccctgacaaaaggatggtgggcggcggtggcagtgccact
gacaggtgccagagcgttaagacctcaacacttccccaccctgagagccttgcaagtgtc
acccagtactgtgtgctttcgcccgtcaagtggtctgatatgaggaagttgaaatctctg
gacccggacaatcaccggccaccaactgggggctatgaccactccacaccaagctcactt
agctgttcctctgcctcggacgtggataaacctttagccaatagggcctacccagagcca
caggcacacaagaccggaggtgacacccctgggagcagccaggctatgatgtcccccctc
cagggctgcgctggggccaggcaggacaacagtaagacctggagcagtacaagactgcac
ggagagtgtgatgaggagaccaagaaatcccagaacatcatcaatatcatccgagagggg
cagatttctctgttgcctcacctggcggctgataacctggagctgatccaggacgaggag
gggaacaacctgctccacatctctgcggcccagggccacgctgactgcctgcagcacctc
acctccctcatgggagaggactgcctcaacgagcgcaacaaccaccagcttacacctgct
gggctcggggtgaagaacggccatttggagtgtgtgcgctggatggtgagtgagacggag
gcaatcgcagagctgagctgtagccgagagcaccccagtctcatccactacgcagcccgc
tatggacaggaaaaggttctgctgtggctgctccaattcatgcaagagcaagccatttct
ctggacgaagtggaccagtacggaaacagtgcagtgcatgtagccgctcagtacggccat
ctcacttgcattcagaccctggtggagtacggctccaacgtcaccgtgcagaaccagagc
ggcgagaggccttcccagagtgccgagcggcagggccacaccacctgcgcccgctacctg
gtggtggtggagacgtgcatgtcgctggcatcccaggtggtcaagctcaccaagcagctc
aatgaacaagcaacaaagacgatagctgtacagaatcaagtccagctactcctggatccc
tcaaaagcagagggaacgtcgtcgcgatcgcccaggtctgatcttccaccactctcccat
gtcccgtctgtggaggcttggcctgagatgaccctgacagcggaggggacccccggggat
ggccactggatactgaggcagaggagcgttgactcagacaccgtcctgcgccagctgctg
ggtaaagacatctcagacaaggtgtgcaccaaggagaagctgtccctggagttccaggag
ggctccagagcggggcctcctaatctgaacggggccaaccccgggcccctgcgcaggatg
ggggtggtggagagacgggagctgaagctggccagactcaagcagatcatgcagcgctct
ctcagcgagtccgactcggacacctacccccctgaagaggccaaacatgcgccccccccc
ggggtgcggctagagagacccagccacctgcccatcgcagagagcgaggagcctgttggc
agcctgcatctggggatgaagaagcacacctcgaccaccgagcacaagtcagctttcgcc
ctcagcacatccaagtccatggatggatacccctcgcccacgtcagacaaaagcgagccg
gacgctgacggtaaaccagaggccggtggagatttccccgactacaacaacggacaaaag
atcacgacgagccccaaaagtgcactcaaatcgcctacctctcgaaggaagacctcccag
aatctgaaactgagggtgacctttgatgagcaggtggttcacaagacggggccaccagag
agtgagccgcccaagggtgcccacagtaaagaaggagcaggaggtaggactcccacgggg
tccgagacggtgaagcgcccattcggaacattccgctccataatggaatcgctgagtggg
aatcagaacagcaataataataacgcccaaacgtctccctctgtcaaacagtcaagctgt
ggtgtgtcccagggctcgcctggcaggaaaacggaggttaaaaccagtccaggtgggcac
tccaagggcaagagcaaagctagtgctgtttag
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