Coregonus clupeaformis (lake whitefish): 121584652
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Entry
121584652 CDS
T08357
Symbol
poli
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121584652 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121584652 (poli)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121584652 (poli)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
121584652 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_HHH_1
IMS_C
IMS_HHH
Cdd1
DNA_pol_lambd_f
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
121584652
NCBI-ProteinID:
XP_041756602
LinkDB
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Position
16:28383886..28394473
Genome browser
AA seq
763 aa
AA seq
DB search
MDVDVEDIDEDETDWNNICSDFVQPPQHTPVGIHGGKYCSKVPVPPVQRVILHFDLDCFY
AQVEMIRNPALRNVPLGIQQKYIIVTCNYVARDLGLTKLMLVTDAKEKCPQLVLVKGEDL
THYRETSYKVTELLMSFCPLVERLGFDENFMDITEMVERRMEQTPESAHYSYKGHVYNHD
TSDAKVMDHPRLAVGSHIAAELRADIHSKLGLTGCAGVATSKLLAKLVSGTFKPNQQTTL
LPESVKDIMGSLSGLRKVPGVGHQTAKRLQALGLVSVQDLQLFPLADLVREFGASTAQRL
QNLALGIDDTAVTPTGAPQSLSDEDSFKKMSSTNEVRQKVEDLLSSLLDRMHKDGRQPLT
LRLTIRRYSATNKWFSRESRQCPIPNHIGQKITSGNSDALAQLVTMAMKLFHKMVDTSTA
FHLTLLNMCFSNLQARCAAVSKGSIASFFTHRSPEKTQASSRCQDDLSQSVLGNLTGQAG
SDVEGKTEELTGQDASHWIPDIPTSLKIKPYTQSTLHSPEASQQQQMVGECCIGGRTVDD
KRTNSPGMTDFPRLPPNIDPEVFRLLPEDIQKELLSPAYPETAHGPLSHSTQSVRPTASE
PADRAHSSHHNFSEQPASLSQPAPCKLNDSFHSTPIDRKETVKGFDRQLNTLTTNNQQEH
SITSLQYSLTDLLEEGNSSTGLVSQRHSADCGFPGNVDPKVFSELPPEVQRELLSEWRQQ
RPVLKISSSSKKQGKSPLAREGKAPAKSSQANNLLKYFKPSSG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggatgttgaggacattgatgaggatgaaactgactggaacaacatttgctcg
gactttgttcaacccccccaacacacccctgttgggatccatgggggcaaatactgcagt
aaggtacctgtaccaccagtacagagagtcatcctgcactttgacctggactgtttctat
gcccaggttgaaatgatccgcaacccagcactgcgaaatgtgcctttaggtattcagcaa
aagtacatcatcgtcacctgtaactacgtggccagggaccttggtttgacaaagctgatg
ttagtgacagatgccaaagagaagtgtcctcagctcgtgctggtcaagggagaggacctg
acacactacagagagacatcttacaaagtcacagagttgctgatgtcgttctgtccatta
gtagagcggctggggtttgatgagaacttcatggacatcacagagatggtggagaggagg
atggaacagaccccagagtctgctcactattcatacaaaggccacgtttacaatcatgac
acctcagatgccaaagtcatggaccaccctagactagcggtgggctcacacattgcagct
gaactgagagcagacatccacagcaagctgggcctcactggctgtgcgggtgttgctacc
agtaaactgctggccaaactggtgtcaggcaccttcaaaccaaatcaacaaaccacactt
ttgccagagagtgtcaaagacatcatgggcagtctaagtggtttacgtaaagtaccagga
gtaggccaccagactgctaagaggcttcaggccctgggattggttagtgtacaggacctg
cagctcttcccattggctgacctggtgagggagtttggagcctccactgctcagcgtctc
cagaatctggccttgggcatcgatgacactgcagtcacccccactggtgctccacagtct
cttagcgatgaagactccttcaagaaaatgtcctcaaccaatgaagttaggcaaaaggtt
gaggatctgttgagtagccttttagacaggatgcataaagatggcaggcagcctttgacc
cttcgactgaccatcaggcgttactctgcaaccaacaagtggttcagccgggagagcagg
cagtgtcccatccccaaccacattgggcaaaagataacctctggcaacagtgatgccttg
gcccagctggtcaccatggccatgaagctcttccacaagatggtggacaccagcacagcc
ttccacctcaccctcctcaacatgtgcttcagtaacctgcaggccaggtgtgctgctgtc
agcaagggatccatcgcctccttcttcacacacagatctcctgagaaaacacaggcctcc
tctcgttgtcaggatgatctgtctcaaagtgtgcttggtaacctcacgggacaggctgga
tctgatgttgaaggtaagactgaggagttgactggtcaggatgcatcacactggatacca
gacatacctaccagtcttaagatcaagccttacacacagtcaacattgcatagccctgag
gcctcccagcaacagcagatggtgggtgagtgctgcataggtggaagaacagtagatgat
aaaaggaccaacagtcctgggatgacagattttcctcgattgccacccaacattgaccct
gaggtgtttagactcctgcctgaggacatccagaaggaactgttatcacctgcctaccca
gagaccgcccatggccccctcagccatagcactcagtccgtcagacccacagcatctgaa
ccagcagacagagcccactcatctcaccacaacttttcagaacagcctgcctctctctct
cagcctgctccatgcaaacttaatgactcatttcacagcactcccatagaccgaaaagaa
actgtgaagggctttgacagacagctcaatacactgacaaccaacaaccaacaagaacac
tcaatcacctccctgcagtattcactcacagacctcttggaggagggaaactcctctaca
ggcctcgtgtcacagaggcattcggctgactgtggtttcccaggaaacgtggaccccaag
gtgttctcagaactacctccagaggttcagagagagctactgtctgagtggagacaacag
agacctgtccttaagatttcctcctcttctaaaaaacagggcaaaagccccctggccaga
gaggggaaggctccagctaaaagcagtcaggctaataacttattgaagtatttcaaaccc
agctcaggttag
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