Coregonus clupeaformis (lake whitefish): 121584658
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Entry
121584658 CDS
T08357
Symbol
scarb2a
Name
(RefSeq) lysosome membrane protein 2a isoform X1
KO
K12384
lysosome membrane protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121584658 (scarb2a)
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GFIT
Motif
Pfam:
CD36
DUF7657
Orthoreo_P10
Ly49
Motif
Other DBs
NCBI-GeneID:
121584658
NCBI-ProteinID:
XP_041756614
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Position
16:28469321..28489153
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AA seq
532 aa
AA seq
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MTRRSCVIYATGIVCAHLLIVGIALVVAQVFQTMIHNRLKKELTLTEASQVFESWKNPPP
PVYMEYYFFNVTNPEVFLAGGKAVVTQIGPYTYREYRPRENVTFLENGTKVYALNPKSFV
FVPEKSRGNPEVDILRTVNIPAVAVMSELNSYSFLLRTFVSMYMNSIGVEIFMTRTVHEV
LWGFKDPLLTKIHSIRPEVDEMFGLMWKKNGTHEGEFVFLTGERDYMEYGRIDTWKGLTE
MSWWSSNQSNMINGTDGSVFHPLLSRKELLYIFAADLCRSIHLGYVEDVEVKGIPAYRFA
PPHDVLQSPEENPTNAGFCVPAGDCLGTGVLKVSVCREGAPIVVSFPHFYQADDKYINAV
EGLHPNKEEHETYLDLNPTTGVPIRACKRAQLNIILNRIPGFPKTKHLNETIFPIMFVNE
TATIDDDSAAQMRTLLLIVTLVSNFPLLIVGMGAILLIVLVILVCRSRQKKNEVKRIDFT
EAFHSFTTAKDETAYTQVSDKPEVEPSENNYTSQPMRNGSYIAMSPVEAQKC
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgactcggagatcctgtgtaatttacgctactggaattgtctgcgcccacctactgata
gtggggatcgccttggttgtggctcaagtcttccaaacaatgattcacaaccggctaaaa
aaggaattgactttgacagaggcaagccaagtatttgagtcgtggaagaacccgcctcct
ccagtctacatggagtattacttcttcaatgtgaccaacccagaagtgttcttagcaggg
ggcaaggcggtggtcacccagattggaccttacacttacagggaatacagacccagggaa
aatgtgactttccttgaaaatggaaccaaggtttatgccctgaatcccaaaagctttgtc
ttcgtcccagagaagtccaggggtaatccagaggttgacattctgaggacagtcaacatc
ccagctgtggcggtgatgagcgagctgaactcctactccttcctgctgcgcacctttgtc
tccatgtatatgaactccatcggcgtggaaatcttcatgacccgcaccgtccacgaggtg
ctgtggggcttcaaggaccctctgcttaccaaaatccacagcattaggccagaggtggac
gagatgtttggactgatgtggaagaaaaatggaactcacgaaggagagtttgtgttcctg
actggtgaacgggactacatggaatatggcagaatagacacatggaaggggttgactgaa
atgtcatggtggtcctctaaccagagcaacatgatcaatgggacggacggcagtgtgttc
caccctctgttgtccaggaaggagctgctgtacatctttgctgctgacctctgcaggtcg
atccatctgggttatgttgaggatgtggaagtgaagggcatcccagcctaccgtttcgcc
ccgccacacgacgtcctgcagagtcctgaggagaaccccactaacgccggcttctgtgtg
ccagctggggactgccttggcaccggggtgttaaaagtcagtgtttgccgagaaggtgca
cctatcgtggtgtcgttcccccacttttatcaggcagatgacaagtacattaatgctgtt
gaaggactgcaccccaacaaggaggagcatgagacttaccttgaccttaacccgaccact
ggggttcccatccgtgcctgcaagagagcccagctcaatataattttgaacagaattcca
ggcttccccaaaaccaaacatctaaacgagaccattttccccatcatgtttgtcaatgag
acggccactatcgacgatgactctgctgcccagatgaggaccctgctactcatcgtgact
ctggtgtccaacttccctctgctcatcgtgggcatgggcgccatcctgctcattgtccta
gtcatcctggtctgcaggtctcgccagaagaagaatgaagtaaaacgtattgattttact
gaagcttttcattcttttactactgcaaaagatgaaacggcctacactcaagtcagcgac
aaaccagaggttgaaccatcagaaaacaactataccagccagccaatgaggaacggctcc
tacattgccatgtctcccgtggaggctcagaagtgttga
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