Coregonus clupeaformis (lake whitefish): 121584707
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Entry
121584707 CDS
T08357
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-like isoform X1
KO
K08561
germ cell nuclear factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121584707
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121584707
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
121584707
Nuclear receptors [BR:
cclu03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
121584707
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121584707
NCBI-ProteinID:
XP_041756693
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Position
16:41442805..41476929
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AA seq
470 aa
AA seq
DB search
MNGVPANWEKHEMDKWEDDAADPRVCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVY
RCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQITDEEIE
RIMSGQEFKEEASLPEHTWSNNGDSSDHSSPSNGASEGNQPSPASTLSSNRSIEMNGGYT
AAVRDQYINTPMNTPYQLLPHLFSYAAQSGLLAPQPCSLYPQSHPLVLQLVAAEDLTPLA
TPMLIEDGYKVTQVELFALLCRLADELLFRQISWIKKLPFFCELSIEDYTCLLSSTWQEL
ILLSCLTIYSAQIFGDLADVTAKYTPSDEELQGFSEDSMEVMERLIYLFRKFHQLKVSNE
EYACMKAINFLNQDIRGLTNVSQLEQLNKRYWYMCQDYTEYKYPHQPKRFPEIMMCLPEV
RFMAGKLVNVPLEQLPLLFKAVLHSCKSSFISNRTGSSPCLTTMGTCPGN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgtcccggcaaactgggagaagcatgaaatggataaatgggaagatgatgca
gctgacccgcgtgtttgccttatctgtggagaccgtgccacaggcctgcactatggcatc
atctcctgcgagggctgcaagggcttcttcaagcgcagcatctgcaacaagcgcgtgtac
cgctgcagccgggacaagaactgcgaaatgtcgcgcaagcaacgcaaccgctgccaatac
tgccgtctgctcaagtgtctacagatgggaatgaaccgcaaagcaatcagggaagatggg
atgccaggagggagaaacaaaagcattgggcctgtccagatcacagatgaagagattgag
cggatcatgtcgggacaggagttcaaggaggaagccagtctcccggagcacacctggagc
aacaacggtgacagtagtgaccacagttctcctagcaacggcgcctccgagggcaaccag
ccatcacctgcttccactctatcatccaatcgttctatagagatgaatggcggctacacg
gctgctgtcagggaccagtatatcaacacccccatgaacaccccctaccagctgctacct
cacctctttagctacgctgcccagtcaggcctgctggccccccagccctgcagcctctac
ccccagtcacaccccctggtgctgcagctagtagctgcagaggacctgactccactggcc
acccccatgctgatagaggacgggtacaaggtgactcaggtggagttgtttgcactgctg
tgtcgtctggccgacgagctgctgttccgtcagatctcgtggatcaagaagctgccattc
ttctgtgagctgtccatcgaggactacacctgtttactcagctccacctggcaggagctg
atcctgctgtcctgcctcaccatctacagcgcacagatctttggagacctggccgacgtc
accgcaaagtacactccctctgatgaggagctgcaggggttcagtgaggatagcatggag
gtgatggagaggttgatctatctgttccgcaagttccaccagttgaaggtcagcaacgag
gagtacgcctgcatgaaagccatcaacttcttgaaccaagatatccgcggtctgactaac
gtctcccagttggagcagctgaacaagcgttactggtacatgtgtcaggactacactgag
tacaagtaccctcaccagcccaaacgcttccctgagatcatgatgtgtctgccagaggtc
cgtttcatggcagggaagctggtgaacgttcccctggaacagctccccctcttgttcaaa
gcagtcttgcactcctgcaaatccagcttcatcagcaacaggacaggaagttccccctgt
ctgactactatgggtacctgccccgggaactga
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