Coregonus clupeaformis (lake whitefish): 121584746
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Entry
121584746 CDS
T08357
Name
(RefSeq) proline-rich protein 12 isoform X1
KO
K05760
paxillin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04370
VEGF signaling pathway
cclu04510
Focal adhesion
cclu04810
Regulation of actin cytoskeleton
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
121584746
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121584746
09142 Cell motility
04810 Regulation of actin cytoskeleton
121584746
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121584746
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121584746
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
LIM domain-containing proteins
Paxillin family proteins
121584746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paxillin
LIM
Motif
Other DBs
NCBI-GeneID:
121584746
NCBI-ProteinID:
XP_041756761
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Position
16:40180903..40221844
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AA seq
1187 aa
AA seq
DB search
MDDLDALLADLESTTSNISKRPVFLSEETPYSFPTGGNSYQDVSVPPPVPPPPSAEALNG
SVIDSLDSHHSSQQSLGSAPKSSWSKDSSSPPLSHIEEDHVYSFPNKQKSADQSAAAMSS
ALGSNLSELDRLLLELNAVQQNSPSFPTTEETAPPLPSCSITHYVQENGGPPDIMVSPPS
QEKTKLNGTQTVEEDRPTVESLLDELEVSVPTPSPSPSVLHSELDSSSQQQARMSASCAT
RELDELMASLSDFKPVLGSLGSMNSDLQLDQAGTSPSITLEVHPLPRTPSSLAAAAPSSL
LTSQPACDSPLFSLPAWELHIEEECGDSGGAVSPPHPSLSSPPPATVTSQSPLSFAESDP
EPNVVIDVSATMLSSRQKSLVVLNHSNPSPSTYASPPNAAKPSLSSASVTLDHNLLKSPS
PSLELGTTPPTVTKSPSPITDINLSFSTPTTTKSLSLVPVSTSRTPSPLPASVTKSPTSP
LTASKAPSPSLVMSPKSPSPPALTSPKISRTVLEPVPAAEPSLDEALDKLLAMSFTKMEN
NRVPTEALQLKGGAPQLKREVVHEEPIMPLDRREVQPDTTGSIRDGESTREGTITRDGSV
MSGHIDGHRELMDWADVELNMCLQDGLDGSMTPYTERPYTDGSMTPMTEASWMDDSLDGS
SCPGTPDAAMDLPLLQPATMDRVSASGHLKSVIRRTKETPNVHPMNREGHPRRGRMGPII
VNKSSSQDRLIEELQGKLGIGRLADRRRKQPDDWLTEGIIVMSKPQRFRGDGAANEVDKI
IITPESPIPQRRVISPPQSPPAPRHPPIIEEPRRPPPVKQIHAPLPPPPPPCPPPQPPPP
QEPIPPPPPLVQPPPVPVQQPPAPKPEPTLPAPLAPAPPPTVKSAPPPPPPKVLVSIGCQ
TEYDPIFPPIEIMAQGKGGPGGPPTQVNKLDNMLGSLQSDLHKLGVQTVAKGVCGACCKP
IVGQVVTAMGRTWHPEHFVCTHCQEEIGSRNFFERDGAPYCEMDYHNLFSPRCHYCNGPI
LDKVVTALDRTWHPEHFFCAQCGSFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAIL
ENYISALNSLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHEHRGSLCSGCQKPITG
RCITAMAKKFHPEHFVCAFCLKQLNKGTFKDQNDKPYCQGCFVKLFS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttagacgctttgttggcggacctggaatccacgacgtccaacatctccaag
cgtcctgtgttcctgtctgaggagaccccctactccttccccactggagggaactcctac
caggatgtgtcagtccctcccccggtgccgccccctccctcggctgaggctctgaatggc
tctgtgatagactccctggactcccaccactcctcccaacagtccttgggttcagctcca
aagagctcatggtccaaggacagtagcagcccgcccctgtcccacattgaagaggaccac
gtctacagtttccccaacaaacagaagtctgctgaccagtctgcagctgccatgagctca
gctctgggcagtaacctgtcagagctggacaggctgctcctggagctcaacgctgtccag
cagaactctccctccttccccaccacagaggaaaccgccccacccctgccgtcctgcagc
ataacccactatgtgcaggagaacgggggtccccctgacatcatggtgagccctccgtct
caggagaagaccaaactgaacgggacccagacggtggaggaggaccggcccactgtggag
agtctgctggatgagctggaggtctctgtacccactcccagccccagcccctctgtcctt
cacagtgagttggactcttcctctcagcagcaggccagaatgtcagcttcctgtgccaca
cgtgaacttgatgagctcatggcctccctttctgacttcaagcctgtcctcggctccttg
gggtctatgaactctgacctccagcttgatcaggcaggaacttcccccagcatcactctg
gaggtccatcctcttccacgtaccccctcctcccttgctgcagctgccccctcctccctc
ttaacctctcaacctgcctgtgactctcctctcttctctctacctgcctgggagctgcac
atagaggaggaatgtggggactcagggggggcagtgtcccctccacatccctcattatca
agccctcccccagcaactgtaacctcccagagccccctgtcatttgcagagagtgaccca
gaaccaaatgtggtcatcgacgtctctgccaccatgctgtcctctcgtcagaaatctctg
gtagtcctcaaccactccaacccttcacctagcacatacgccagtcctcctaatgctgct
aaaccatcactgagctcagccagcgtcaccctggaccataacctcttaaaatcccctagt
ccctctctagaacttggtacaactccccctactgttaccaagagccctagtcccataact
gacattaatctaagtttctctactccaaccactaccaagagtcttagtcttgttcctgtc
tctacttccaggaccccttcacctctccctgcttctgtcaccaagtcccctacctctcct
ctcactgcttctaaagccccctcaccatctctggtcatgtctcccaagtctccctctccc
ccagctctcaccagccccaagatctccaggacagtgctggagccagtccctgcagctgag
ccctctctggatgaagccctggataagctgctggccatgagtttcaccaagatggagaac
aatagagtccctactgaggcactgcagctgaagggaggggcacctcagctgaagagggaa
gtggtgcatgaggagcccatcatgcccttagacagaagggaggtgcagccagacaccacc
gggagtatccgggatggggaaagtacccgtgaggggacaattacccgtgatgggtcagta
atgagtggacacatagatggccacagggagctcatggactgggctgatgtggagctgaac
atgtgtctccaagatggactggatggtagtatgactccttatacagagagaccttataca
gatggcagcatgacccctatgactgaggccagctggatggatgactccctggatggctcc
tcctgccctggaactcctgatgctgccatggacctgcctctgctgcagcctgccaccatg
gacagggtctctgcatctggacatcttaagtcagtgattaggcgcaccaaggagacaccc
aacgtgcaccccatgaaccgagagggtcacccccggagggggcggatgggccccatcatc
gtcaacaagagcagctcacaggaccggctcatagaggagctgcaggggaagctggggatt
ggccgattggctgaccgccggcgcaagcagccagacgattggctcactgagggcatcatc
gtcatgtccaagccacagcgtttccgtggcgatggggccgcgaatgaggtggacaagatc
attattaccccagagtcacctatacctcagaggagggtcatttccccaccccagtctccc
ccagcccctcgtcaccctcctattatagaagaacccaggagacccccacctgttaagcag
atccatgctcccctacctcctccccctcccccctgtccccctcctcaacctcctccaccc
caggaacccatccctcccccacctccgcttgtacaacccccaccggtcccagtacagcag
ccccctgcccccaagccagagcccactctgcctgctcccctggccccagcgccccctcca
acggtgaagtctgcaccaccaccacctccccccaaggtcctggtgtccattggctgtcaa
acagaatacgatccaatcttccctccaattgagatcatggcccagggaaaaggtggccca
ggaggccccccaacacaggtcaacaagctggacaacatgctcggcagcctgcagtctgac
ctccataaactgggtgtgcagactgtggccaagggagtgtgtggggcctgctgtaaaccc
atcgtgggacaggtggttactgccatggggcgcacgtggcacccagagcactttgtgtgc
acacactgtcaggaggagataggctccagaaacttcttcgagcgtgacggagcgccctac
tgtgagatggactaccacaacctgttctccccacgctgccactactgtaacggacctata
ctagacaaagttgtgaccgcgttggacaggacatggcatcctgaacacttcttctgtgct
cagtgtggatcattctttggcccagagggcttccatgagaaggacgggaaggcgtactgt
aggaaggactactttgacatgtttgcacctaaatgtggcggctgtgcccgagccatcctg
gagaactacatctctgcgctgaactccctttggcatccagagtgctttgtatgcagggag
tgcttcaccccttttgtgaatgggagtttctttgagcatgatgggcagccctactgtgag
gtgcactaccacgagcaccgcggctccctctgctctggctgccagaagcccatcaccggc
cgctgcatcacggccatggccaagaagttccacccggagcactttgtctgtgccttctgc
ctcaagcagctcaacaagggcaccttcaaggatcagaacgacaagccctactgccaaggc
tgctttgtgaagctcttcagttag
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