Coregonus clupeaformis (lake whitefish): 121584756
Help
Entry
121584756 CDS
T08357
Name
(RefSeq) hepatocyte nuclear factor 1-alpha-like
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121584756
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121584756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
HTH_37
HTH_5
Motif
Other DBs
NCBI-GeneID:
121584756
NCBI-ProteinID:
XP_041756783
LinkDB
All DBs
Position
16:complement(39924918..39976201)
Genome browser
AA seq
557 aa
AA seq
DB search
MEGEERKVGAGPGPGRLTNLQNELIWALLGSGVSREVLVQALEELEQERVTPGTKKGDRG
DGESSEEGEMDFPPPIFQELEALAPEEATRQRALVNQLLQEDPWRVAKLVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVRKQGEISQQFTNARHGLGTGEE
QGEDVRKGRRNRFKWGPASQQILFHAYERQKNPTKEEREGLVEECNSAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDSPYTSQSASTTNQTFSHNPVQGMKYSQ
QITCDSLGSVKGHSGDRGLADCLASPIQLEPSHTLLETNHHKLVSGGGPLPPVSTLTSLH
SLSASPSPPQGLIMASLPSVMCLGESSLLIGQTVPVINNVGGGFTTLQPISFQQQLHSSS
QQQLTQQFQSHMGHSPFMATMAQLPCHMYSKSDMSSYPPSSLLSQATVITDSSSLGTLTS
LSAVRQILTTDPEEETDQPIKDASLHLQTPSPVAVSSGNLELYPPSQSNETHPPHLLSSS
PADINSYIPEQMVSTAQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggagaggaaagtgggagcagggcccggccctgggcgtctgactaatctc
cagaacgagctgatctgggctctgctgggctctggagtgtcccgggaggtcctggtccaa
gcactggaagaactggagcaagagagggtcacccctggaacaaagaagggggacagggga
gatggagagagttcggaagagggagaaatggattttccacccccaatattccaggagctg
gaggcactagccccagaggaggcaaccagacagagggctctggtcaaccaactgctgcag
gaggatccatggcgtgtggcaaaactggtgaagagctatatgcagcagcataacctcccc
cagagagaggtggtagagtccacaggcctcaaccagtcccatctctcccagcacctcaac
aaaggcacgcccatgaagaaccagaaacgggctgctttgtacagttggtatgtcaggaag
cagggtgagattagccagcagtttaccaatgccaggcatggccttgggactggagaggag
cagggagaagacgtgaggaaaggacggaggaacaggttcaaatggggacccgcctcccag
caaatcctattccacgcctatgaacgacagaagaacccaactaaagaggagagagaggga
ttagtggaggagtgtaacagtgctgagtgtctccagaggggtgtgtctccatcgcagctg
gctggactgggctctaacctggtgacagaggtacgagtgtacaactggttcgctaaccgc
cgcaaggaggaggccttccgccataaactggctctcgattcgccttacaccagccaatca
gcaagcaccaccaaccaaactttctcacacaaccctgtgcaaggcatgaagtacagccag
caaatcacatgtgacagtctgggatcagtgaagggtcacagtggagaccgaggcttggca
gactgcctggccagccccatccaacttgagcccagccacacactcctggaaacaaaccat
cacaaactagtatcaggaggtggtccactgcccccagtaagcaccctgacctcactgcac
agtctgtctgcctcgccttctcccccccagggactcatcatggcctccctgcccagcgtc
atgtgtctgggagagtcttctctcctcataggtcaaacagtacctgtcatcaacaacgtg
ggaggcgggttcaccacccttcagccaatctctttccagcagcagcttcattcctcttcc
cagcagcaactcacacagcagttccagagtcatatgggccacagtcctttcatggcaacc
atggcacagcttccatgccacatgtacagcaagtccgatatgtcttcctaccctccgtcc
agcctactgtcccaagccacggtcatcactgacagcagcagccttggaacactgaccagt
ctaagtgcagtcagacagattctgaccacagaccctgaggaggagacagaccaacccatc
aaggatgcctccctacacctgcaaaccccttcacctgtggcagtttcctctgggaactta
gagctgtatcctccatctcagtctaatgaaactcatccacctcacctcctctcctcttcg
ccagcagacatcaactcctacattcctgaacagatggtctctactgcacagtag
DBGET
integrated database retrieval system
