Coregonus clupeaformis (lake whitefish): 121584793
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Entry
121584793 CDS
T08357
Symbol
adamtsl7
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121584793 (adamtsl7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121584793 (adamtsl7)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
121584793 (adamtsl7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
PLAC
TSP1_CCN
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
121584793
NCBI-ProteinID:
XP_045071131
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MAGWCQQQQHCVSSWLGLVLLRLTLALCLLYPSSDALPWETQASGSPVEDYEVVSGTFSR
PVLSVGYHKILEIPAGATNIRIQESVKTRNYLALRTLSGVSIINGNWAIDRPGLIVAVGT
RLTYRRPNEIRSRTGESITAPGPTNEELHLYLIYQQPGPSVYYEYSLPLHDTHPAILPLV
ETVGPTYSGSNDVTSGMGMAINDVSGGKGHPNQVPSDPVVNPDLLAPPHGWISSGHTACS
ASCGGGRRQALWECVETESQTTVPSDLCSHAQRPPNQEVVCNTQPCPAFWDLGEWSECSR
TCGPGSQHRQVICRQALGNHSNGTATVVTVETAQCRGYDRPETTSSCQLKICSEWQIRSE
WSPCSVPCGVGQSSREVVCVGNQGDVEGDDQCNLGVKPAPLQNCDMGPCARHWFTSPWST
RCSTECGEGSRSRSAVCLLDHVTKLPLDGCDGARPQEVTSCDAGPCHRHLEWYTGPWGQC
SAECGNGTQTRGVACLLHDNGRLEAVDQSNCSHLDRPMSSQSCHLKVCGVQWYTTDWSTC
SRSCDGGYRVREVCCLADNVTPSDLCDLSSTPESREECNTQPCLPEKVSSCSDQYYNCVL
VVQARLCLYTYYRTACCSSCS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtggtgtcagcagcagcagcattgtgtgtcctcatggctggggctggttctc
ctcagactcaccctggctctctgcctcctctacccgtcctcggatgctcttccatgggaa
acacaggccagtggctcccctgtggaggactatgaggtggtaagtgggaccttctctcgg
ccggtgctcagtgtgggctaccacaagatactggagataccggctggagctactaacatc
aggatacaggagtctgtcaagaccaggaactatctggcgctgcggactttgagtggtgtc
tccatcatcaacggcaactgggcgatcgaccgcccgggcctgatcgttgccgtgggaacc
cggctgacataccggcgacccaacgagatccgctccagaaccggagagtccatcaccgca
ccgggacccaccaacgaggagttacatctatacttgatctatcagcagcctggtcccagt
gtgtattatgagtacagccttcctctccatgacacacaccccgccatactgcccctggtt
gagactgttggccccacctactcaggaagcaatgatgtcaccagtggaatgggcatggcc
atcaatgatgtcagcggtgggaagggccatcccaaccaggtgccctctgaccccgtggtg
aaccctgacctcttggctcctcctcacggctggatcagcagcggccacacagcctgcagc
gcctcctgtggtgggggtagacgccaggcgctgtgggagtgtgtggagactgagagccag
accacggtaccaagtgacctctgtagccacgcccagcgacccccaaaccaggaagtggtc
tgcaacacccagccctgccccgccttctgggacctgggggagtggtcagaatgcagcaga
acctgcggtccggggtcccagcaccgccaggtcatctgtcgtcaggcgctcggtaaccat
agcaacgggacggcaacggtggtcaccgtggagacggcgcagtgcagaggttatgatagg
ccggagacgacatcgtcctgtcagctgaagatctgcagcgagtggcagatacgctccgaa
tggagcccgtgttcagtcccgtgtggtgtgggccaaagcagcagagaggtggtgtgtgta
ggtaaccagggggacgtagagggggacgaccagtgtaacctgggggtgaaaccagctcct
ctccagaactgtgacatgggaccctgcgcacgacactggttcacctcaccatggagcaca
cggtgttctacagagtgtggcgagggcagtcgtagtcgctcagcagtgtgtctgttggac
catgtgactaaactaccattggacggctgcgacggggcccgcccacaggaagtgacgtca
tgcgacgcagggccgtgtcaccgccacctggagtggtacactggaccctggggacagtgt
tcggcggaatgcggaaacggaacccagaccaggggcgtggcctgtctactccatgacaac
ggtcgcctggaggctgtggaccaatcaaactgctcccacctggatcgaccaatgagctct
cagagctgccacctgaaggtgtgtggggtgcagtggtacaccaccgattggagcacgtgt
tctcgctcctgtgacggaggttaccgtgtgcgtgaggtgtgttgtcttgccgacaacgtg
acccctagtgacctgtgtgacctcagttcgacccctgagagtcgggaggagtgtaacacg
cagccctgtttacctgagaaagtgtcatcatgtagtgaccagtactataactgcgtcctg
gtggtccaggcccggttgtgtctctacacctactacagaactgcctgctgttcatcctgc
tcctga
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