Coregonus clupeaformis (lake whitefish): 121584816
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Entry
121584816 CDS
T08357
Name
(RefSeq) leucine-rich repeat LGI family member 3-like
KO
K19999
leucine-rich repeat LGI family member 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584816
Membrane trafficking [BR:
cclu04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121584816
BRITE hierarchy
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_9
LRR_14
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
121584816
NCBI-ProteinID:
XP_041756889
LinkDB
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Position
16:complement(35823127..35833484)
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AA seq
550 aa
AA seq
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MLDAGSRRVPGWLRLLAGLCLLLCLVGETGAKRVPKIPRCPVTCSCTKDSAFCVDTKAIP
KSFPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTVVADDAFAGLSHLQYLFI
ENNDIQALSKHTFRGLKSLTHLSLSNNNMQFLPRELFKYLDILTDLDLRGNSLRCDCKIK
WLVDWMEKTNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYETFPFQSVSVESY
EFNDNQFVAFAQPDTGFCTLFVWDHVEMVFRRYHNITSRSAVYCKPVVINNTLYMVVAQL
FGGSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDDEWYFAVADSSKAGSTSIYRW
NSNGFYSHQSLHPWHRDTHVEFLDVEGKQRLILSSASQPPVVYQWNRSLRQFAFHSQITE
TFDIQMVKHFWVRNILYLCLTRFIGDSKILRWEGQRYVEIQTLPSRGSMAVYPFTVGPRQ
YLLLGSDFSFSRVYLWDDLTQLFQPFQELNMRAPRAFNLVSVDNKDILLAASFKGNTLAY
QHLIVDLSAK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgccggatcgagaagggtcccgggatggctgaggcttttggccggcctatgt
ctgcttctctgcctggtgggggagacaggggccaagagggtccccaaaatcccccgctgt
cctgtcacctgctcctgcaccaaagacagtgccttctgtgtggataccaaggctatcccc
aagagctttccccctgggatcatctccctgacaatggtgaatgcagccttcactacgatc
ccagagggagccttctcccacctgcacctgctgcagttccttcttctgaactccaatacc
ttcactgtggtggctgatgatgcctttgcaggtctgtcacacctgcagtacctatttata
gagaacaatgacatccaagccctgtcaaagcataccttcagagggcttaaatccttgact
cacctttctctgtcaaataataacatgcagttccttccacgagaactcttcaaatatctt
gatattttgacagacttagacctgcggggtaactctttacgctgtgattgtaaaatcaag
tggcttgtggactggatggagaagaccaacacctctgtccctgccatctactgtgccagc
ccatttgagttccaaggccgcagaatccatgatctcaccccacgagacttcaactgtatc
agcgcagactttgcagtttatgagactttccctttccagtctgtgtcagtggagtcctat
gaattcaatgacaatcagtttgtggccttcgcccagcctgatacagggttctgtacactg
tttgtatgggatcatgtggaaatggtcttccggaggtaccataatataacatctcgctcc
gctgtctactgcaagcctgtggtgataaacaacactctttacatggttgtggctcaactt
tttggaggatcccacatctacaagtgggaagaggacccacagcgatttgtgaagatccag
gacattgacaccacacgtgtgaggaaacccaactttgttgagaccttccagctggatgat
gagtggtactttgcagtggcagacagttccaaggcaggctctacaagcatataccgctgg
aacagcaacggtttctactctcaccaatcccttcatccctggcatcgtgacacccatgtg
gagttcctagatgtggaggggaagcagcgtctcattctctccagtgcctcccagccccca
gtggtttaccagtggaaccgcagcctgcgccagtttgcctttcattcccaaatcactgag
actttcgacattcagatggtcaagcatttctgggtgcgcaacattctctacctctgcctt
acacgcttcattggtgactccaagattctccgctgggaggggcagcgctatgttgagatt
cagaccctgccctcacgtggctccatggctgtgtatccattcactgtgggcccccgccag
tatctcctcctagggagtgatttctctttctctcgagtttacctgtgggatgacctcacc
cagctcttccagcccttccaggagctcaacatgagagcaccccgggccttcaacttggtg
tctgtggacaacaaagacatcctgctggcagccagcttcaaaggcaacaccctagcctac
cagcacctaatagtggatctcagtgctaaatag
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