Coregonus clupeaformis (lake whitefish): 121584823
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Entry
121584823 CDS
T08357
Name
(RefSeq) early growth response protein 3-like
KO
K12497
early growth response protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121584823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121584823
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
121584823
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3446
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2HC_2
zf-C2H2_15
Zf-C2H2_ZNF451_1st
zf-C2H2_ZNF462_1st
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121584823
NCBI-ProteinID:
XP_041756899
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Position
16:complement(35464438..35472710)
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AA seq
419 aa
AA seq
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MTGKLADKLPLIMSSLTNTIPDSLYQEEDIPTSMNIFTNTDSINHYSQMNTDNIMDLGMG
SDKGNAEIQYGSNFQSSRSGQPVTYLGKFAFDTPPSGGIGGSGWCSDNNIISLVSAGILG
VSPSPGTITAQTSSSGASMGGQSSDTEQVYCPPLPAYSTCSDLYQDQVSFHHSPATSTAL
GYPSNDYHTTSKPSMDGSLFSMIPDYNIFHHQGEVGMMEHKPFQSMDPIRVNPPPITPLE
TIRAFKDKQIHPGFMGGQQHAPQHHQPPQTLTLKPIRPRKYPNRPSKTPVHERPHACPAE
NCDRRFSRSDELTRHLRIHTGLKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCEFCGR
KFARSDERKRHAKVHFKQKDKKPADKGSGAAGSHSSPPSSCGGSGGPSGGNIMTVTTCA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacagggaaactagcggacaagctccctcttatcatgagcagtttaacaaacacgatt
cctgacagtctttaccaagaagaggacattccgacgtctatgaacattttcaccaatacg
gattctataaaccactactcgcaaatgaatacagataatatcatggatctggggatggga
agtgataagggaaatgcagagatccagtacggctctaacttccagtccagccgcagcggg
cagcccgtgacctatctggggaagtttgccttcgacactcctccatcgggtggaattggg
ggctctggctggtgttcagacaacaatataattagtttagtaagtgctgggatcctgggc
gtctccccgtcgcctggcactatcaccgcacagacgtcgtcctctggagccagcatgggc
ggccagtcatcagatacggagcaggtctattgtccgccactgcccgcttattccacctgc
agtgacctgtaccaggaccaggtctccttccaccacagccctgccaccagcactgccctc
ggctaccccagcaatgactaccacaccacctccaagccctccatggacgggagccttttc
tctatgatcccagactataacatcttccatcatcagggtgaggttggcatgatggagcac
aagcctttccagtccatggaccccattcgtgtcaaccccccacccatcacaccactagag
accattcgagcattcaaagacaagcagattcatccaggtttcatgggtgggcagcagcat
gctcctcagcaccaccagccaccacagacactaacactcaaacccatccgaccacggaag
tacccaaaccggcccagcaaaacccctgtgcatgagcggccacatgcctgcccagcagaa
aactgtgacagacgcttctcccgttcagatgaactgacacgccacctccgcatccacaca
ggtctcaaacccttccagtgccgcatatgcatgcgctcctttagccgaagcgaccacctg
actacccacatccgcacgcacacgggcgagaagcccttctcctgtgagttctgtggacgc
aagttcgcccggagtgatgagcgcaaaagacatgccaaagttcacttcaagcagaaggac
aagaagccggccgacaaggggagtggggcggctggcagccacagctcaccccccagttcc
tgcggtggcagtggggggcccagcggtggcaacatcatgactgtcactacttgtgcttag
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