Coregonus clupeaformis (lake whitefish): 121584824
Help
Entry
121584824 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121584824
00071 Fatty acid degradation
121584824
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121584824
09143 Cell growth and death
04216 Ferroptosis
121584824
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121584824
03320 PPAR signaling pathway
121584824
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121584824
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121584824
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121584824
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121584824
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121584824
Exosomal proteins of breast cancer cells
121584824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121584824
NCBI-ProteinID:
XP_041756900
LinkDB
All DBs
Position
16:35388159..35401307
Genome browser
AA seq
714 aa
AA seq
DB search
MHFQEWFQSLRFSGGVRGPEREDFWSLVPSLPSLSSFSVSLSPSSLLGIGALASFTAYWL
VTRPRPMRPPCDLNAQSIPVQGEPNWRRSALLKDDVLLEFYYDDTRTAYDMFQRGLRVAG
DGPCLGFRKPGEPYQWISYSEVAEQAQVLGSGLLGKGCQPNPEQFVGIFAQNRPEWIISE
LACYTFSMAVVPLYDTLGEEAMVHILNLAEISLVICDKEEKAESLLGNKEKGVTPTLSCL
VLFNACSDAIVERGKNCGVEILELTQLMELGRQNLTEPVPPQPQDLAVVCFTSGTTGKPK
GAMITHGNIASNSSSVIKILEGSFVIQQEDVSISYLPLAHMFERMIQVSMLCHGARVGFY
QGDISLLMDDIKTLKPTFFPVVPRLLNRIYDKILGSMTSPLRRAVLHYAVRRKQAELSSG
VVRNNSLWDRLVFNRIQANLGGNLRFILTASAPISPTVLSFLRATLGCLIFEGYGQTECT
AGCTFSMPGDWSAGHVGAPLPCAMVKLVDIPDMNYYAKNGEGEICIRGHSVFRGYLKDEE
KTTEALDSDGWLHSGDVGQWLPNGTLRIIDRKKHIFKLSQGEYIAPEKIENVYMRCVPVL
QVFVHGDSLQGHLIGIVVPDPEVFIDWVKERGIVGTYEELCQNPDVKKEVLEDMTAVGKE
AGLKSFEQVKDLHLHPEMFSVSNGLLTPTLKTRRVDIHRVFQEQITNMYSTTAI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcaggagtggttccagtcccttcgtttcagtgggggggttcgaggacctgag
agggaggacttctggagccttgtcccctctctcccttcattgtcctctttctccgtctct
ctgtccccgtcctctctgctgggtataggggctctggcctccttcactgcatactggctg
gtgacccgccctcggcccatgcgtcctccttgtgatctgaatgcccagtctatccctgta
cagggagagcccaattggaggcgttcagctttgctcaaggacgatgtcctgttggagttc
tactatgatgacaccaggacagcttatgatatgttccagagaggactgagggtggcaggg
gatggcccatgccttggcttcaggaaacctggggaaccttaccagtggatctcctacagt
gaggtggctgaacaggcacaggtgctgggctctgggcttttgggcaaaggctgccaacca
aaccctgagcagtttgttggaatatttgcccagaacaggccagagtggatcatttcagag
ctggcctgctacaccttctcaatggctgtagtgcccctgtatgacacactcggagaggag
gccatggtgcatatcctcaaccttgcggagatctccctggtgatctgtgacaaggaggag
aaggcagagtcccttctggggaataaggagaagggtgtgacgcctactctctcctgtctg
gtgctcttcaatgcctgcagtgatgccatagtggagagggggaagaactgtggtgtggag
attctagaactcacacagctcatggaacttggacgacagaacctcacagaacctgtgcca
ccccaaccccaggacctggcagtcgtgtgcttcaccagtggaacaacaggaaagcccaag
ggagccatgatcacccacggcaacatcgcctccaactcctcctctgttattaagatcctg
gaggggtcatttgtgattcagcaagaggacgtgtcaatctcttacctgcctcttgcccac
atgtttgagaggatgattcaggtgtccatgttatgtcatggggccagggtaggattctac
cagggggatatctccctgctcatggacgatattaagactctgaaacccaccttcttccca
gtggtgcctcgcctactcaaccgcatctacgacaagatcttaggctccatgacgtcccca
ttgcgccgggcagtgctgcactatgcggtgaggaggaagcaggctgagctcagcagtggg
gtggtacgtaacaacagtctgtgggacaggctggtgttcaacaggattcaggctaattta
ggaggtaatctgaggttcattctgaccgcctcggcccccatctcccccaccgtgctctcc
ttcctcagggccaccctcggctgtctgatcttcgagggttacgggcagactgaatgcaca
gcaggctgcaccttctccatgccaggtgactggagtgcaggccatgttggtgctcccctg
ccctgtgccatggtgaagttggttgacattcctgatatgaactattatgccaagaacgga
gaaggagagatctgtatccgtggccacagtgtgttccgggggtacctgaaagatgaggag
aaaacaacagaggccctggacagtgatggctggctgcacagtggagatgtgggccagtgg
ctaccgaatgggacacttcgcatcatcgacaggaagaagcacatcttcaagctgtcccag
ggagagtacattgcccctgagaagattgagaatgtctacatgcgttgtgtccctgtgcta
caggtctttgtgcacggagacagcctacagggtcacctgatcggtattgttgtgccagac
ccagaagtgttcattgactgggttaaggagaggggaatcgttggaacctatgaggaactc
tgccagaatccagatgtgaagaaagaagtgttagaagacatgacagccgtggggaaggaa
gctgggctgaagtcatttgagcaggtgaaggacttgcacctgcatccagagatgttcagt
gttagcaacggtctcctcacccccactctgaagaccagacgagtggacatccacagggtc
ttccaggaacagataacaaacatgtacagcacaactgccatctag
DBGET
integrated database retrieval system
