Coregonus clupeaformis (lake whitefish): 121584842
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Entry
121584842 CDS
T08357
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121584842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121584842
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121584842
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Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
121584842
NCBI-ProteinID:
XP_041756931
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Position
16:34632131..34688641
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AA seq
372 aa
AA seq
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MALTVNLIGPSPWGFRIYGGRDFKKAITVSKVNGGSKAELAALQPGDVILEINGENTVDM
LNVEAQNKIKNSKTQLQLLVERPEPPSPEQTNGTTTPEQLTGRFQEAVLVSRDENQNYRE
YSISSPASLSPGPYSPEAPSSPEGKRERLTPTSTKSIQLRSWSPEEKTSSHRLSRPLSQE
FSSPDFRSNSVSSRTPTPPGRYLPHSPIDRELSVSPRRSSSSSDFAMQRFDRDSEVYKMI
QENKESRTAPRQSNTFRMLQEVLESDEKEAVVRFPGLSPKPTPPKPTSPGVGIPKYHTCE
KCGTSIVTQAVRIMDDRFRHPECYTCATPECGLNLKMRGHFWVGEEMFCEKHARENYQGL
GTAPRATISPHH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacagtgaacctgattggtccgtctccatggggctttagaatttacggagga
agggacttcaagaaggcgataacagtttccaaggtcaacgggggcagcaaggccgagctg
gccgccctgcagcctggtgatgtcatcctggagatcaatggagagaacacagtggacatg
ctcaatgtggaggcccagaacaagataaaaaactccaagactcagctgcagctgctggtg
gagaggcctgagccgcccagccctgaacagaccaacggaaccaccaccccagaacagctc
actggacgcttccaggaggcggtgctggtgagtcgagatgagaaccagaactacagagag
tactccatctccagcccagcctccctgtcacctggaccctactccccagaggccccgtcc
agtcctgaggggaagagagagaggctcacacccaccagcaccaagagcatccagctgcgt
tcgtggtctccagaagagaagacgtctagtcacagactgtccagaccactgtcacaggag
ttctcctctcccgacttcaggagtaactctgtgtccagtcgaacccccacccctccagga
cgttacttgccccacagcccaattgaccgtgagctgtctgtctcccccagacgcagcagt
tccagctcggactttgccatgcagaggtttgaccgggattcagaggtctacaagatgatc
caggagaacaaggagtctcgcacggcccctcgacagtccaacaccttccgcatgctgcag
gaggttctggagtctgatgagaaggaagcagttgtgcggttcccagggctctcccccaaa
cccacccctcccaaacccacatcacccggggtcggaatccccaagtaccacacctgtgag
aagtgtggcaccagcattgttacacaggcggtgcgcatcatggacgaccgcttccgccac
ccagagtgctacacctgtgctacaccagagtgcggtctcaacctaaagatgcgaggtcac
ttctgggtgggagaggagatgttctgtgagaagcatgcccgcgagaattaccagggcctt
ggcactgccccccgtgccaccatctcaccccaccactga
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