Coregonus clupeaformis (lake whitefish): 121584858
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Entry
121584858 CDS
T08357
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121584858
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
121584858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_NPHP3
TPR_14
TPR_6
TPR_9
TPR_19
HlyE
AP4E_app_platf
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
121584858
NCBI-ProteinID:
XP_041756966
LinkDB
All DBs
Position
16:33463067..33667885
Genome browser
AA seq
2374 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRES
LEPTYQQLQKMKLDKSPFVVVSVIGQELLTAAHHTASVVVLESALKIGTCSLKLRGSVFS
ALSSAHWSLGNTEKSTGYMQQDLEVSKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHR
HQLVLAMKLKDREAASMALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEAQELG
NMGAVYIAMGDFENAVQCHEQHLGIAKALTNKREEARAYSNLGSAYHYHRNFDKAMSYHT
HVLELAQELEEQPIEMRAYAGLGHAARCMQDLERAKQYHQQQLAIAEGLKDRAAEGRASS
NLGIIHQMKGDYETALKLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGAFDQAVRYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALG
NLGNFHCSRGEFPQAVPYYEQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYQDAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALG
NLGDIFVCRKDVTGAIQFYEQQLALAHQMKERRMEACAYAALGAAYRLVQKYDKALGYHT
QELEVYQELGDVPGECKAHGHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPGVEAQVYG
NMGITKMNVGVMEEAIGYLEQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIK
YYDQYLSVAQSLNRMQDQEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQ
AYGELGALHSQLGNYEQAISCLERQLGIARDTQDRPLEGDASCGLGVVYQSMGEYETALR
CHQSDLEIAEETGSPARQSRAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTL
AYGSLGRTHHALQNYSQAVMYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLDEAQH
QLYRASALFETIRHEAQHSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQKDSDPYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGIL
KFHQVYLGEGVTEGGPDLHEGGGGGVASGSSLEQHIASAREALGVESYYSRGCSSSETES
EAGDLLDQQFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGCSS
LPRRPSSLSKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGS
SSNEYLYERFSLIAVPSIRGLGTSSKSHSRRAGPASCGGVSMAAVVGNPRLPSSVMDRWL
WGPMPSAEEEALMVSELLGCQPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTP
NPESIPGGAGAGAGVGTGGRGVGGGRRGSGGRGRKGSFGCSYTIPESLRLQDDGSDVESI
CDSPPLQEFLLTAADILDLRLPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLV
SLWPVPVSASKVFVHAFYTALLNGTKASAALADAMKTVQNSKQYSHPSNWAGYMLIGNDV
KLNSPSSLIGQALAEILQYPERARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKV
GGVPGWHALLTAVGFRLDIPAAVFFPTADPGDRLQQCSTTLQSILGLPPPALQALCKLIT
ASEAGEQLINRAVKNMVGMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLA
ALGFDLCEVGQEDVVLKTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLAS
AQSVSNPLPLGYPNPPFSPPCLDNLASDAISVYSLSSVASNMSFASKSECDFLGHRQRGG
ATAHFSAHKHPHVPRSRSSPHGVAAAAGGGRGDDEEYEGFSIISSEPLGSHCDSLPLPPG
HGQRHLHRGGKGVVGGSNSGAGRGYQVSVSSRGSVSTPTSPVKTSLVPSPNSPFQKVPGK
VSSSDTGESDQSSTETDSTVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGAEG
AAAGATARNSAFRSSETSAFSRPSSSTSVRAQSSPRPKPPSRSSSLQKISSGYNSPAASE
TSLKDGSHPSPTLDSHAQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYS
STGSACSSPADVPDLDRLRRGVIDEKVVAIHNLKTFWANAAAQQQQQHLGPVRALRGTPG
PLVSAKRDVLSLLNLSPRHCSPSDAQDSLELRELGLHSLDRGSKNPSNGHNPRKVAPSPT
ISTSSSPGARSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttccgacagggtgttgcccttcagtac
cttggtcgccatgccgacgcactggccgcctttgcctcggggctggcccaagaccccaag
agcctgcagctactggtgggcatggtggaggctgccatgaagtccccactacgagagtca
ctggaacccacctaccagcaactgcagaagatgaaactggacaagagtccgttcgtggtg
gtgtcagtgattggtcaagagctgctgacagcggcccaccatactgcctccgtggtggta
ctggagtccgcattaaagatcggcacctgcagcctcaagctgcgtggttccgtcttctca
gcactcagcagcgcccactggtccctgggcaataccgagaagagcaccggatacatgcag
caagacctggaggtctccaaaacactaggtgaccaaacaggtgaatgccgtgcccatggt
aacctgggctcagcattcttttccaaggggaactaccgcgaggccctgaccaaccatcgt
caccagctggtcctggccatgaagctcaaagacagggaggcagcttctatggccctgagc
agcttgggtcatgtgtacacagccatcggggactaccctaatgccctggccagccacaag
cagtgtgtcttactggccaagcagtccaaggaccagctgtcggaggcacaggagctgggc
aacatgggtgccgtctacatcgccatgggcgactttgaaaacgctgtccaatgtcacgag
cagcacctgggcatcgccaaggccctgaccaataagagggaagaggcccgtgcctacagc
aacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccacacc
catgtgctggagctggcccaggagctggaggagcagcctatagagatgagggcgtacgct
gggctgggtcacgctgcacgctgcatgcaggacctggagagagccaagcagtaccaccaa
cagcagctggccatcgctgagggcctgaaggacagggctgcagagggaagagcctcctcc
aacctgggcattatccaccagatgaaaggagactatgagactgcactgaaactccacaaa
acccacctctccatcgcccaggagctcagtgactatgctgcccagggccgggcctacggt
aacatgggcaacgcctacaacgcgctgggggcctttgaccaggctgtgcgctaccaccgc
caggagctacagatctccatggaggtcaacgaccgagcctcccaggcctccacccatggt
aacctggccgtggcctaccaggctctgggggcccacgaccgcgccctgcagcactaccag
aaccacctcaacatcgcccgcgagctgcgagacgtccagagtgaggctcgcgcactgggc
aacctggggaacttccactgctcccggggagagttcccccaagccgtgccctactacgag
cagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaagtctgccac
aacctgggctacgcccactactgcctgggaagctaccaggacgctgtcaagtactatgag
caggacctagccctggctaaggacctgcatgacaagctgagccaggccaaggcctactgt
aaccttggactggccttcaaggctctgggtgactttaccaaggcagaggagtgtcagaag
tacctgctctctttagcccagtctcttaataatgcgcaggcccgcttccgagccctgggc
aacctgggggacatctttgtctgcaggaaggatgtgaccggagctatccagttctatgag
cagcagctcgccctggctcaccagatgaaggagcgcaggatggaggcgtgtgcctacgct
gccctgggtgccgcctacagactggtgcagaagtacgacaaggccctgggctaccacacc
caggagctggaggtgtaccaggagctgggcgatgtgcccggggagtgtaaagcccacggc
cacctggcagctgtctacatggccctggggaagtacgccatggccttcaagagctacgag
gagcagctagagctgggccgcagactgaaggacccgggggtagaggcccaggtctacggc
aacatgggcatcaccaagatgaacgtaggggtgatggaggaggctataggctacctggag
caacaactggccaccctgcagcagctgagtggcaacgaggccgtactggaccggggcagg
gcctatggtaacctgggagactgttacgaagccttaggggactttgaggaggccattaaa
tactacgaccagtacctgtctgtggcccagagcctgaaccgcatgcaggaccaggagaag
gcctaccgaggcctggggaatggacacagggcgatgggtaacctgcagcagtccctggtt
tgctttgagaagcggctggtggtggcccatgagcttggtgagtgtggagggaaggcccag
gcctacggggagctgggggcgctccacagccagctggggaactatgaacaggccatctcc
tgtctggagcgccagctaggcatcgcccgcgacacccaggaccgcccactagagggtgac
gctagctgcggcctgggtgtggtgtatcagtccatgggggagtacgagactgccctgcgc
tgccaccagagtgacctggagatcgcagaggagacgggcagccccgcccgacagagccgt
gcctatggcaacctgggcctcacctatgagtcgctaggcaactatgagcgtgcggtggtg
ttccaggagcagcatctgagtgttgcagctcagaccaacgacctggcagccaagaccctg
gcctacggtagcctggggaggacacaccacgcgctgcagaactactcacaggctgtcatg
tatctgcaggaaggcctacggctggcggagcagctggctcggcgtgaggatgaggctaag
atccgccatcgtctggggctgtctctgtgggccagtgggaacctggatgaggcccagcac
cagctctaccgagcatctgcactgtttgagaccattcgtcacgaggcccagcacagcacc
gactacaaactgtctctgtttgacctgcagacctcctcctatcaggcactccagagggtc
ctcgtcagcctaggccaccatgacgaggcgttggcggtggcagagcggggtcggacgcga
gcatttgctgacctgctggtggagaggcagacaggccagaaggactcagacccctacacc
ccagtcacagtggagcacatcctggacacggtgaacagccagagggccctggtgctctac
ttctccatggctgctgggtacctgtacagctggctgctggctccaggagcaggcatcctg
aagttccatcaggtgtacttgggagagggtgtgacagagggcgggccagacctccatgag
ggtgggggagggggtgtggccagcggctcgtctttggagcagcacattgccagtgctcgg
gaggccctgggagtagagtcctactacagcaggggttgttccagcagtgagacagagagt
gaggcaggggacctgttggaccagcagtttgaggagctcaacaacaaactcaactctgtg
actgaccccactggcttcctccgcatggtgtccagaaacaatctcttcaacaggagctgc
cagagtatgaccagcctgttcagtaacaccatgtccccagccaaagatggctgctcctct
ctgccccgccgacccagcagcctcagcaaacctcctctccgtgctctctacgacctgctc
atcgcacccatggaagggggcctgatgcactccagtggtcctgtgggcagacacagacag
ctggtgttggtgttggagggggagttgtacctcatcccctttgccctgctgaagggtagc
tcctctaatgagtacctgtatgaacgcttcagcctcatcgctgtgccctccatccggggc
ctggggaccagctccaagagtcattctcgtcgggcggggccggcttcctgtgggggcgtg
tccatggcggcggtggtgggaaaccctcgtctgccgtcgtcagtgatggaccgctggcta
tgggggcccatgccctcggccgaggaggaggccctcatggtgtctgagttgctgggctgc
cagcccctggctggatcctctgccaccaaggagagggtgatgagtgccctcacccaggcc
gagtgtgcccacttcgctacacacatctcatggaagctggccgccttggttctcacaccc
aacccagagagcatacccggcggggcaggggcaggggcaggggtggggactggagggaga
ggggtagggggagggaggagaggcagcggcggcaggggcaggaagggctcgtttggctgc
agctacaccatcccagagagcctgcgcctgcaggatgatgggagcgacgtggagagcatc
tgtgacagccctcccctgcaggagttcctgctcacagctgctgacatacttgacctgagg
ctgcctgtcaaactggtggtgctggggtcataccaggagtccagcagtaaggtgacagca
gacggtgtggtaggtctgaccagggccttcctggctgctggggcccagtgtgtcctggtg
tctctgtggcctgttcctgtctcagcctccaaagtgttcgtccatgcgttctacaccgcc
ctgctcaacgggaccaaggccagcgctgccctcgcagacgccatgaagactgtccagaac
agcaagcagtactcccacccctccaactgggcaggctacatgctgattggtaatgatgtg
aagctaaacagcccctcgtccctgattggccaggctctagcagagatcctacagtatcca
gagagagcacgggatgctctacgagtcttattgcacctggtggagaagtctctccagagg
attcagaatggccagcgtaactccatgtacacctcccagcagagtgtggagaacaaggtg
gggggcgtcccaggctggcatgccctgctgaccgctgtgggcttccgcctggacatccct
gctgctgtcttcttccccacagcagaccctggagacaggctgcagcagtgtagcaccacc
ctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgtaaactcatcact
gcctctgaggcaggcgagcagctcatcaaccgggctgttaaaaatatggtgggaatgctc
caccaggtgctggtccagctgcagacaggggagaaggagcaggacttctctctgctgccc
atccaggtgtccatcagtgtgcagctctggagactgccaggctgccatgaattcctggct
gcactagggttcgacctgtgtgaggtggggcaggaggatgtggtactgaagacggggaag
caagccaaccgccgcaccatgcactttgccctccagtccctactggcactatttgactcc
acagagctgccaaagcgtctcagcctggacagctcgtcctccctggagtccctggcctcg
gcccagtctgtctccaaccccctaccactgggctaccccaacccacccttctccccaccc
tgcctggacaatctggcctcagacgccatctccgtctacagcctgagctccgtggcctcc
aacatgagctttgcgtccaagtcagagtgtgacttcctgggccatcgacagcgtggtggg
gccacagcacacttctccgcccacaaacacccacacgttccccgcagtcgctcctctcct
cacggggtggctgcagcagcaggagggggccggggagatgacgaggagtatgaaggcttc
tccatcatcagcagtgagcctctgggaagtcactgtgactccctgcctctacctccgggt
cacgggcagcgccacctccaccgcgggggaaagggtgttgttggggggtccaactcgggc
gctgggcggggttaccaggtctctgtgtcgtcacgaggcagtgtcagcacccccacttcc
cctgtcaagaccagcctggttcccagccccaactctcccttccagaaggtgccgggaaag
gttagcagctcagacacaggtgagtcggaccagtccagcactgagacagacagcaccgtc
aaatcccaggaagagaagactgtccctctggatccccaagagctggcccagaagatcttg
gaagagacccagagccacctgcgggcggtggggagtctacagcgggctggggctgagggg
gctgcagctggagccacagccaggaactctgccttccgctcctcagagaccagcgccttc
agccgtcccagtagcagcaccagtgtccgcgcccagtcctccccacgaccaaaacctcca
tcccgctcttcctctctgcagaagatcagctctggttacaacagccctgcagcctcggag
acctccctaaaggatggcagtcacccctcccccaccctggacagccatgcccagttcaag
ctaaaataccccagctccccctatagtgggcacatctcccgctctcccagtaacgtgtcg
cccagctctggccaccagtccccagctggcagtgccccatccccagccctctcctactcc
tccacgggctctgcctgctccagccctgccgatgtcccagacctggaccgcctcagaagg
ggtgttatcgatgagaaggttgtggccatccacaacctgaagacattctgggccaatgca
gcggcccagcaacagcagcagcatctgggtccagtccgggctctccgtggcaccccagga
cccctagtctctgccaagagagatgtgctgagccttctgaacctctccccacgacactgc
tcccccagcgacgcccaagacagcctggagctgcgggagctggggctgcactcgctggac
aggggcagcaagaacccctccaacggacacaaccccagaaaggtggccccctcgcccact
atttccactagcagtagccctggtgctcgctctatcagactacctgctggaaatggatac
aagttcctctcccctggcaggtttttcccctcctccaaatgctga
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integrated database retrieval system
