Coregonus clupeaformis (lake whitefish): 121584861
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Entry
121584861 CDS
T08357
Name
(RefSeq) rabphilin-3A-like
KO
K19938
rabphilin-3A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584861
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121584861
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Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
PI3K_C2
FYVE_CARP1-2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
121584861
NCBI-ProteinID:
XP_041756970
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All DBs
Position
16:33162648..33198905
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AA seq
625 aa
AA seq
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MTDTVMGGSSDPWVPNDRQMSMHANDKEKGNWTNQARPGPGAPDLTDEEKEIINGVIARA
EKMEAMEQERIGRLVNRLDDMKKTVCGDGVNRCLLCGEQLGVPGVSSVVCEDCKKHMCTK
CGVQSSSRPRSVWLCKICSEQREVWKRSGAWFFKGFPKQFLPSPMPISKSKESSAQRAPE
PQEPASSDPRAAAGQPWPQVQARGPEAQGHAGKPPVASKPSDVHMATGGAGPGAQNSPVV
LQKAVPVQSSRPPPAALAQQAPLETEGGDYSTSTAPLEERVPPAVREERRQPATYNPPPA
RQQAPPPEEEEDANSYDSDEATTLGGLEFSLLYEQENNSLHCSILKAKGLKPMDSNGLAD
PYVKLHLLPGASKSNKLRTKTLRNTRNPAWNETLVYHGLTDEDMQRKTLRISVCDEDKFG
HNEFIGETRVALKKLKVNQKKNFNVCLERVVPTKKTATAGGARGISLYEDEGGKEVGDVE
ERGRILISLMYSTQQNRLLVGVVRCVHLAAMDANGYSDPFVEICLKPDMGKKAKNKTNIK
KKTLNPEYNEEFSYDIKHSDLAKKTLDISVWDYDIGKSNDYIGGCQLGITAKGERLKHWY
ECLKNKDKKIERWHTLLNENPVNSN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacggacacagtgatgggcggtagctcggacccctgggtgcccaacgacaggcagatg
agcatgcatgccaatgataaggaaaagggtaactggaccaaccaggccaggcctggtccc
ggcgctccggacctgactgacgaggagaaggaaatcattaacggtgtgatcgcccgtgct
gagaagatggaggccatggagcaggagagaattgggcgcctggtgaaccgtctagatgac
atgaagaagacggtgtgtggggacggggtgaaccgctgtctgctgtgtggggagcagctg
ggtgttccaggggtcagctcagtggtgtgtgaggactgcaaaaagcacatgtgcaccaag
tgtggagtgcagagcagcagccggccgcgctctgtgtggctctgcaagatctgcagcgaa
cagcgagaggtgtggaagcgatctggtgcctggttctttaaaggctttcctaagcagttc
ctgccctcacccatgcccatctcgaagtccaaagagtcaagtgcccagcgagccccagag
ccccaggagccagcatcatctgaccccagggctgcagctggtcagccctggccacaggta
caggccagaggaccagaggcacaggggcatgctggcaaaccacctgttgcctctaagccg
tcagatgttcacatggccactggtggggctggtcctggtgctcagaacagcccagtggtg
ctgcagaaggctgttccagtccagagctccaggccccctccagcagcattggcccagcag
gctccactggagacggagggaggtgactactccactagcactgctccattggaggagaga
gtgcctcctgcagtgcgggaggagaggagacagcctgccacctacaacccccctcctgct
cgacaacaagcccccccgcccgaggaggaggaggatgcaaacagctatgactcggatgag
gccaccactctgggcggcttggagttcagcttgctttatgagcaggagaacaacagtctc
cactgcagcatcctcaaagccaagggactgaagcccatggactccaacggactggctgat
ccctatgtcaagctgcatctactgccaggggccagtaagtccaacaagctacgcactaag
acactgagaaacacccgtaaccctgcctggaacgagaccctggtctaccacggactcaca
gacgaggacatgcagcgcaagactctcaggatctctgtctgtgatgaggacaagtttggg
cataatgagtttatcggagaaactcgcgttgcgctaaagaaactgaaggtcaaccagaag
aaaaacttcaacgtgtgtctagagagagttgtccctacgaagaagaccgcaacagctgga
ggggctcgaggcatttcgctctacgaggatgagggtgggaaggaggttggagatgtggag
gagcgtggtcgtatcctgatctccctcatgtacagcacccagcagaatcgtctccttgtc
ggtgtagtgcgctgtgttcacctggccgccatggatgccaatggatactctgacccattt
gtcgaaatatgcctgaaacctgatatggggaagaaggccaagaacaaaacaaatatcaag
aagaagaccctaaacccagagtacaacgaggaatttagctatgacatcaagcacagtgac
ctggctaagaagaccctggacatctcagtgtgggactacgacattgggaaatccaacgat
tacatcggtgggtgccagctgggcatcacagccaaaggggagcggctgaagcactggtat
gagtgcctgaagaacaaggacaagaagatagagcgctggcacaccctgttgaatgagaat
cctgtcaacagcaactaa
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