Coregonus clupeaformis (lake whitefish): 121584901
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Entry
121584901 CDS
T08357
Symbol
si:ch211-225b11.4
Name
(RefSeq) thyroid adenoma-associated protein homolog isoform X1
KO
K24169
thyroid adenoma-associated protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121584901 (si:ch211-225b11.4)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
121584901 (si:ch211-225b11.4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2428
TPR_Trm732_C
TPR_Trm732
Motif
Other DBs
NCBI-GeneID:
121584901
NCBI-ProteinID:
XP_041757077
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All DBs
Position
16:complement(31545333..31563517)
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AA seq
1875 aa
AA seq
DB search
MVPVESVEDQMKAVLDCVVTEDKIPTDVSTTLKLFINKLDECSRSSIKRCKERSLEEAGQ
LLRKIPVKQLQCLEEKLLLSLIRLLVAMQMQMFNIASRKLDQMLQHLAEVNRFLVFREIH
HCLSTIVGKEQALSIGDLQRACMFLEDSSIGRELWREACPSLINKVAELFPVILEQEGLR
NGPLCYQAVKVCLQVFQLLPGEVAPLVWEKEQGSLAMQRILQSLMDIILGQCSNRDTRLL
AGTTVAMLINTVLEGGEGGAAAWSLLQVTHSEPWQLCVGGLQVQCSPRAQDGVDRLAVSR
GLLTCCRRGILVSQVDTTGTCLLLDGLFPLVSALCEEKLDCHYYVFEVLTLWLKSVKESL
AEIWEVTSAPLLPDDSSLRQQLIQVIWNNAESPVEGVSEVVRSAFCLLLEIYEMDCQRFG
DTQKNLHISLLHRITKLPWEAKAKYFPLCSLLPYVGTDLVLEQYSELPNHLLKCMSTNYL
SPCASELYKCLIQKQRRELCEEVAQDAPPLELDLANQWARRWRSTLLEALTSDVTLLQNN
VSSHLLPWTLRVFPSAVEPLLAPLDPASPGHLHAWACVMSARRATCGGSPWALESGSALE
TLRLALGCVDDRVRLAALNLLCCSPKTKESPTPEELSTMRTFIPQNLNSESSPFRQHLQA
GVKRFLVRIRDSCLAHLRGLKGKRDGGASLTKETEMALDQGVGFVDWLSQLPLSYLAPGH
SYQRKKTVLLLLSAVLETCTDTWSPDKKKGQPPVNMASLINWARLRGWWDFFSRSKQLVL
IGCLEDSTNEIRELSAGLLVRFFPPSFLEDITPVLFGRAELLLCSPRVPEAQMGALIMKV
LLQKSGGQSHVPWLDSRINYVSSGDSKASTLVRYLLKELEQHYLIAKDDMMLAARTKPIH
GILTALERCILEVPNTLCDVVDHRVTIEILVLLERITLLLLGVLYGDQDACGDEKDVPPS
FCDMGNAITSLIGQVAGEDQGEGDECVLLSEEHSLVLTCCWVSLKEIGIFLGSLVERILA
QAKQTESFLTLEDLKRASKVFKNILLKCRHWGAVEGCCVGFTRFCACLLSSSDPELRDIP
AHMLKQGLEVLQSRCTSVTRRAAGLPMLILCVVSAEEASKARPLLAHSIHTLLDTARSPL
PQEWDQTLDLPQVCAVHTLQALVRGSGLGVAVLQFAPAVAILSLTLLSSPCWAMRNAALQ
LYSSLCSRLLGQRSGGEEGSTQHGMSPPAFFTHYPALQPFLLGELRGAAEDLQCPSGEAR
LRLHPSLYPVLTLLAKLQRGVQDQTGRTLSDFLIPLLQLAASPIYSVRVMTSKALVAMTP
PSQYVSTLLRLTGELPEPQDPSCHNRLHGQLLQIRAILDRGLCTQSPPPDALCDVVDRVE
SRLWLVTGAQHCPLVRGAYLGVAGLLRGLCSQGFLHQMRDVLLSELHSPHQRLKVGSASF
HQNAIHFLCAEPRWACQVWGSFSTESSDLRLSLVSWAAERRRWSGTSMQQVLQTALQANL
KEALLDQSVEYSRTYLTTLVAVMTPGADPTLSQEPSPSSPLEGLVLLECVELLLGALEGH
RGGPEFLSQALCAASLLLSQSLQTSLFPRWCSLLEVHRGPEAPEALRMACAWALCHAGAP
LLSTALRDHTPLPIFSTRLINTGLYLLQDESQQVRIKAAGFASTLCQARRGGGERSMYLM
QVNQALPFLLELLLEECWDSPGVLEVLLCHLPQSDLSSVLREARDTGCASLYEQDEANVF
AEPSVMSACLLPYLLQLAEKYPASSVVVERLGVWARENVTDLLENLRVCKDLQPGDTLDP
AWLALLMDSSFHGALCGLWARAAFLLRLLEMSDDLRPLCDPDSLRKNIQEVNCVLSQNGV
QLPAAFTAVLTRDLP
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctgttgaatcggtcgaagatcagatgaaagctgtactagactgtgtggtcact
gaggataaaatacccacagatgtcagcactacgttaaagcttttcataaacaaacttgat
gagtgctcaaggagcagcataaagcgatgcaaagagcgcagtctggaggaggcaggccag
ctgctgaggaagatcccagtgaagcagctccagtgtttagaggagaagctcctcctgtca
ctcatcaggctactcgtcgccatgcagatgcagatgtttaacatcgccagtcgcaaatta
gaccagatgttgcaacatctggcggaagtcaatcgttttctggtttttcgagaaatccac
cactgtttgtccaccatagtgggaaaggaacaggcattatcaattggggacctccagaga
gcctgcatgttcctggaggacagctctattggtcgtgagctgtggagagaggcctgccct
tccttgataaataaagttgctgagttattccctgtaatactggagcaggagggtttgaga
aatggcccactgtgttaccaagctgtcaaggtgtgtttgcaggtgtttcagctgttgcca
ggtgaggtggcccctctggtgtgggagaaggaacaggggagtttggcaatgcagaggatc
ctacagtctctaatggacatcatcctgggacagtgctccaacagggacacccgtctcctg
gctgggaccacagtggccatgctgatcaacacggtactagagggaggggagggaggagca
gctgcctggagtctgctacaagtcactcactcagagccctggcagctgtgtgtgggtggt
ctccaggtgcagtgcagcccccgggcgcaggacggagtggacagactggccgtgagcagg
ggtctgctgacctgctgtagaaggggcatcctagtcagtcaggtggacaccacagggact
tgtctactcctggatggtttgtttcctttggtctctgctctgtgtgaggagaagcttgac
tgtcactactacgtctttgaagtgttaacactgtggctgaagagtgttaaggagagtcta
gctgagatctgggaggtgaccagtgctcccctgctgcctgatgactctagcctgagacaa
caactcatccaggtcatctggaacaatgctgagagtccagtcgagggtgtgtcagaggtt
gtgcgcagtgcgttctgcctgctgctggagatctatgagatggactgccagcgttttgga
gacacacagaagaatctacacatttccttactgcaccgcataaccaaactgccctgggag
gccaaagccaaatacttccccctctgttcactgctcccctatgtaggcactgacttggtg
ctggagcagtactctgagcttcccaaccatctcctgaagtgcatgtccaccaattatctg
tccccatgtgcctcagagctttacaagtgtctgatccagaagcagagacgggagctgtgt
gaggaagtggcccaggatgctcctcccttggagctggatctggccaatcagtgggccagg
cgttggcggtccactctgctggaggccttgacctctgacgtgacccttcttcagaacaac
gtctccagccacttgctgccctggactctgcgggtcttcccctctgctgtggagcccctg
ctggcccctctagaccctgcctctccagggcacctccatgcctgggcctgtgtgatgagt
gcccgccgagcgacttgtggaggctccccctgggccctggagagtggctctgccctggag
accctccgtctcgccctcggatgtgtggacgatagagtccgcctggccgccctcaacctg
ctgtgctgcagcccaaagaccaaagagagcccgacgccggaggagctgtctaccatgagg
accttcatcccccagaacctcaacagtgagtcgtcaccattccgccagcacctccaggcg
ggggtgaagaggtttctggtccggatccgagacagctgcctggcccacctcagaggactg
aagggaaaaagagacggtggtgccagcctcacaaaggagacagagatggcacttgatcag
ggagtagggtttgtggactggctgtcccagctgcccttgtcctatctggcaccaggacac
agctaccagaggaagaagactgtcctgctgctgctgtctgctgtactagagacgtgcaca
gacacctggagcccagacaagaagaagggccagcccccagttaacatggcctctttgatc
aactgggcaaggctgagaggatggtgggatttcttctctagatcaaaacagctggtcctt
attggctgtttagaggattccaccaatgagattcgggagctctctgcagggttactggtg
agatttttcccacctagttttctggaggacattactcctgtgctgtttggccgagcagaa
ctgctcctctgcagtccccgtgtaccggaggctcagatgggagctctgatcatgaaggtc
ctcctccagaagtctggaggtcagtctcatgtgccctggctggacagccgtatcaactac
gtcagttctggggactcaaaggcctctactctggtcaggtatctactcaaggaactcgag
cagcattacctgattgctaaggatgatatgatgcttgctgcaaggaccaaacccatacat
ggtattttgactgccctagagaggtgtatactagaggtacctaacaccctgtgtgatgtg
gtcgatcacagagtgaccatagagatcctggttctcctggagaggatcactctgctcctc
ctgggtgtgctgtatggagaccaggacgcctgcggtgatgagaaagatgtacccccatct
ttctgtgacatggggaatgccatcacctctctgataggccaggtggcaggagaggaccag
ggggagggggatgagtgtgtgctgctgtctgaggaacacagcctggtcctcacctgctgc
tgggtctccctcaaggaaataggaatctttctaggttctctggtggagagaatccttgct
caggccaaacagacagaatcctttctaactttagaagacctgaagagggcctctaaagtg
ttcaagaacattcttctcaaatgccgccactggggggcagtagagggctgctgtgtgggc
tttaccaggttctgtgcctgtctcctgagcagcagtgacccagagctcagggatatccca
gcacacatgctgaagcaggggctagaggtgctgcagtctcgctgtacgtcagtgacccgg
cgggcggcagggctgcccatgctcatcctgtgtgttgtgtcagcagaggaggccagtaag
gcccggcccctcctggcccacagcattcacaccctgctggacacagccaggtcccctctg
ccccaggaatgggaccagacgctggacctgccacaggtgtgtgcagtccacaccctgcag
gccctggtacgaggctctgggctgggggtggctgtgctgcagtttgccccggctgtggcc
atcctgtccctgaccctcctcagctccccctgctgggccatgaggaatgctgccctgcag
ctctacagctctctgtgctcaaggttgctgggtcagcgctctggaggtgaagagggctcc
acccagcatggcatgtctccccccgccttcttcacccactaccctgccctgcagcccttc
ctcctgggagagttgaggggggcggcagaggacttgcagtgtccctctggggaggcccgg
ctccgcctgcacccctccctctaccctgtcctcaccctcctggccaaactccagcgaggg
gtccaagaccaaacaggcaggactctgtcagacttcctgattccactgctccagctggct
gccagtcctatctacagtgtgagggtcatgacctccaaagccttggttgccatgacgccc
ccctcccaatacgtgagcaccctgctccggttgacaggagagctgccggagccccaggac
cccagctgtcacaatcgtctgcatggacagctactgcagatcagagccatcctggacagg
ggtctatgcacacaaagtcctcccccagatgccctttgtgacgtggtggaccgtgtagag
tccagactgtggttggtgacaggggctcagcactgccccctggtgcgtggggcctacctg
ggtgtggcaggcctgctgagggggctctgctctcaggggttcctccaccagatgagggat
gtgctcctgtcagagctccactcaccacaccaaaggctcaaggttgggtccgcctccttc
catcagaacgctatccacttcctgtgtgcagagcccaggtgggcttgccaggtgtggggg
agtttctccacagagagctccgacctgaggctgtcattggtcagttgggcggcggagagg
cggagatggagtgggaccagcatgcaacaggtgctgcagacggcactgcaggccaacctg
aaggaggcgctgttggaccagagtgtagagtacagcaggacatatctgacaaccctagtg
gcagtgatgactcctggggctgaccctactctgtcccaggagccctccccttcttccccc
ctggagggtctagtcctgctggagtgtgtggagctgcttctgggggccctagagggccac
agaggggggccagagttcctctcccaggccttgtgtgctgccagcctgctgctctcccaa
agtcttcagacatctctgttccctcggtggtgcagtctgttggaggtccaccgggggccg
gaggcccctgaggctctcaggatggcctgtgcctgggccctgtgtcatgctggggccccc
ttactgagcacggccctgagggaccacactcctctccctatcttcagcactaggttgatc
aacacagggctttacctgctgcaggatgagagccagcaggtgaggataaaagcggccggt
tttgcctccacactctgccaagccaggagaggaggaggggagaggagcatgtacctgatg
caggtcaaccaggctctgcccttcctgctggagctgctgctggaggaatgctgggatagt
cctggtgtcctggaggtgttgctgtgtcacctgccccagtctgacctgagctcagtactg
agggaggccagggacactgggtgtgccagtctctatgagcaggatgaagccaacgtattt
gcagaaccgtctgtgatgtcagcatgtctgcttccatacctgcttcagcttgctgaaaag
tacccagcatcctcagtggtggtagaacgcctgggtgtgtgggccagggagaatgttaca
gacctgctggagaacctccgggtctgtaaagacctccagccaggtgacaccctggacccg
gcctggttggctcttctcatggattctagtttccatggcgccctgtgtggcctgtgggcc
agggcagcattcctcctgcggctgctagaaatgtctgatgacctccggcccctctgtgat
cctgatagtttacgtaagaacatccaggaagttaactgtgtgctcagccagaacggtgtc
cagttgcctgctgcctttactgcagttctgactagagacctgccttga
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