Coregonus clupeaformis (lake whitefish): 121584910
Help
Entry
121584910 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121584910
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121584910
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584910
04121 Ubiquitin system [BR:
cclu04121
]
121584910
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121584910
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121584910
Membrane trafficking [BR:
cclu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
121584910
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121584910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121584910
NCBI-ProteinID:
XP_041757090
LinkDB
All DBs
Position
16:complement(30879213..30899085)
Genome browser
AA seq
511 aa
AA seq
DB search
MFHYSRSENIPLCRPTTSEKLIREFWYSGSIVRNKMMKNWGVIGGIAAAMAAGVYVLWGP
ITNRKKRQKGMVPGLLNLGNTCFMNSLLQGLAACPSFIKWLEEFTSRKCVSEDEPEKDPK
LSRTLLQLLKALSNDDSGQEDVLDAGCLVEVLRLYRWHITSFEEQDAHEFFHVLTSSLEE
ELDRQPKVTHLFDIQSLESLPDKDELTLSCRSRGPLHPIRSPWKFPHPFHGCLTSNMACK
RCEQRSPVRYDSFDSLSLSIPSTQWGRPVSLDHCLQHLISSETIKEVECENCTKLQQGAL
VNGQVLESQRTTFIKQLKLGKLPQCLCIHLQRLTWSNEGTPIKRQEHVHISEYLAMDHYK
HCATIQRLQRINCTLKTIKAEDWGEAVDKTTPNAKDVEHHYNNKPLSNGTCLSVFLHSPG
LSPQRNLPYNYSSSEYLFQLMAVLVHHGDMHSGHFVTYRRCPPSSSSPSPFSSQWLWVSD
DSVRKASLQEALSSNAYLLFYERVRCLRSEE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttccattactctaggtcagagaatatcccgttgtgcagaccaacgacatctgaaaag
cttattcgtgagttctggtactctggatccatagtcaggaacaaaatgatgaaaaattgg
ggagttattggtggaatagcggctgccatggctgctggagtatatgtcctgtggggtcca
attacaaaccgcaagaaaaggcagaaaggcatggttccaggcctgctgaacctgggaaac
acctgcttcatgaactctctgctccagggcctggcagcctgcccttccttcatcaaatgg
ctggaggagtttactagccgcaaatgtgtgtcagaggatgagccagagaaggaccccaag
ctttctagaactctcctgcagcttctcaaagcactgtcaaacgacgactctgggcaggag
gatgttctggatgcagggtgtctggtggaggtcctcagactctacaggtggcacatcact
tcctttgaggagcaggatgcccatgagttcttccatgtcctcacctcctctctggaggag
gagctagaccgacagcccaaagtcacccacctctttgacattcagtcccttgagagcctc
ccagataaagacgagttgaccttgagctgcaggagtcgaggccctcttcatcctatacga
agtccttggaagtttccacatcctttccacggctgcctaacaagcaacatggcatgcaag
cgttgcgaacaacggagtccagtgcgctatgactctttcgacagcctctccttatccatc
ccttcgacgcaatggggccggcctgtctctctggatcactgtctccagcatttgatctct
tcagagaccattaaagaggtggagtgtgaaaactgcaccaagcttcaacaaggagcctta
gtgaatgggcaggtcctggaaagccagaggacaaccttcatcaaacagcttaaactggga
aagctcccccagtgtctctgtatccacctgcagagactgacatggtccaatgagggcact
cccataaagagacaggaacatgtccatatctcagagtacctggctatggaccactacaaa
cactgcgccaccattcagaggctccaacgcatcaactgtactctgaaaaccattaaagca
gaggactggggagaggctgtggataagaccactcccaatgccaaagatgtagaacaccat
tacaacaacaagcctctgtccaatggaacctgtttgtctgtctttctccactctcctgga
ctcagcccacagcgcaacctcccatataactacagctcctcagagtacctcttccaactg
atggctgtgttggttcaccatggtgacatgcactcaggacactttgtcacataccgccgt
tgcccaccctcgtccagcagcccctctccattcagctcccagtggctgtgggtgtcagac
gactcagtacgcaaggccagcctgcaggaggcgctctcctccaacgcctacctgctcttc
tatgagagggttagatgtctacggtcggaggagtag
DBGET
integrated database retrieval system
